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Quantum mechanical interpretation of the IR Spectrum of 2-deoxy-D-ribose in the oh group stretching vibration region
Authors:T Yu Nikolaenko  L A Bulavin and D N Govoruna
Abstract:Within MP2/6-311++G(d,p)//DFT B3LYP/6-31 G(d,p) theory, taking into account the anharmonicity of the vibrations, we have calculated the vibrational spectra of all the conformers of the furanose, pyranose, and linear forms of the 2-deoxy-D-ribose molecule. Based on the calculation, we have interpreted the experimental IR spectrum of this molecule in the region of stretching vibrations of the OH groups. For the α and β anomers of the pyranose form of the molecule, we observe and explain the difference between the populations realized in the experiment and the calculated thermodynamic equilibrium values. We present the structures of the eight isomers of 2-deoxy-D-ribose determining its IR spectrum in a low-temperature inert matrix.
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