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Characterization of PolyA and PolyC mismatches by Raman spectroscopy
Authors:Yubo Liao  Yaoyong Meng  Haodong Lei  Ying Wang
Abstract:A.C mismatches are studied by Raman spectral characterization of PolyA, PolyC, and their equimolar complex in solution of 0.14 mol/L Na ,pH7.0.Experimental results show that A·C mismatches occur to be A/B (mainly A) conformers, and unlike Watson-Crick base pairing, this kind of mismatches is stabilized by only one hydrogen bond involving cytosine N4H2 and adenine N7.The formation of A·C complex makes the base stacking interactions much stronger, and conformation of the backbone more ordered, which leads to obvious Raman hypochromic effect with some shifts in corresponding bands.
Keywords:Raman spectroscopy  PolyA  effect  bands  conformation  ordered  stacking  interactions  kind  hydrogen bond  involving  cytosine  adenine  base  pairing  Experimental  results  show  complex  solution
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