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Comparison of conformer distributions in the crystalline state with conformational energies calculated by ab initio techniques
Authors:Frank H Allen  Stephanie E Harris  Robin Taylor
Institution:(1) Cambridge Crystallographic Data Centre, 12 Union Road, CB2 IEZ Cambridge, UK;(2) Department of Pharmaceutical Sciences, University of Aston, B4 7ET Birmingham, UK;(3) Zeneca Agrochemicals, Jealott's Hill Research Station, RG12 6EY Bracknell, Berks, UK
Abstract:Summary The conformational preferences of 12 molecular substructures in the crystalline state have been determined and compared with those predicted for relevant model compounds by ab initio molecular orbital calculations. Least-squares regression shows that there is a statistically significant correlation between the crystal-structure conformer distributions and the calculated potential-energy differences, even though the calculations relate to a gas-phase environment. Torsion angles associated with high strain energy (>1 kcal mol-1) appear to be very unusual in crystal structures and, in general, high-energy conformers are underrepresented in crystal structures compared with a gas-phase, room-temperature Boltzmann distribution. It is concluded that crystal packing effects rarely have a strong systematic effect on molecular conformations. Therefore, the conformational distribution of a molecular substructure in a series of related crystal structures is likely to be a good guide to the corresponding gas-phase potential energy surface.
Keywords:Ab initio  Cambridge Structural Database  Conformational energy
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