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Anisotropic friction model of DNA electrophoresis in polymer solutions: Comparison with direct observations
Authors:Hiroshi Noguchi  Masanori Ueda  Yoshinobu Baba  Masako Takasu
Abstract:
The electrophoresis of DNA chains in uncrosslinked polymer solutions with a Brownian dynamics simulation with an anisotropic friction tensor was analyzed. According to the degree of anisotropy, three types of migration behavior are obtained: fluctuation without or with periodicity between U‐shaped and compact conformations, or migration with linear conformation. We found good agreement between our simulation results and the direct observations of DNA by fluorescence microscopy. © 2003 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 41: 1316–1322, 2003
Keywords:separation techniques  simulations  morphology
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