Strong and selective binding of amiloride to an abasic site in RNA duplexes: thermodynamic characterization and microRNA detection |
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Authors: | Sato Yusuke Ichihashi Toshiki Nishizawa Seiichi Teramae Norio |
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Affiliation: | Department of Chemistry, Graduate School of Science, Tohoku University, Aoba-ku, Sendai 980-8578, Japan. |
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Abstract: | Firmly tied: The binding affinity of amiloride for an abasic (AP) site-containing RNA duplex is two orders of magnitude superior to the affinity of the corresponding AP site-containing DNA duplex. The observed high binding affinity for the RNA duplex arises from a favorable enthalpy gain. The binding-induced fluorescence response of amiloride is applicable to microRNA detection. |
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Keywords: | abasic sites fluorescence RNA thermodynamics |
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