The Study of <Emphasis Type="Italic">cis-trans</Emphasis> Equilibrium and Complexation with DNA of <Emphasis Type="Italic">meso</Emphasis>-Substituted Carbocyanine Dyes |
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Authors: | P G Pronkin A S Tatikolov M Yu Anikovskii V A Kuz’min |
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Institution: | (1) Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, ul. Kosygina 4, Moscow, 119991, Russia |
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Abstract: | The effect of DNA was studied on cis-trans equilibrium and spectral and fluorescent properties of a number of meso-substituted carbocyanine dyes: 3,3′-diethyl-9-thiomethylthiacarbocyanine iodide (K1), 3,3′-diethyl-9-methoxythiacarbocyanine iodide (K2), 3,3′-9-triethylthiacarbocyanine iodide (K3), 3,3′-dimethyl-9-ethyloxacarbocyanine iodide (K4), 3,3′-9-triethyl-5,5′-dimethyloxacarbocyanine iodide (K5), and 3,3′,9-triethyl-6,6′-dimethoxyoxacarbocyanine iodide (K6). Equilibrium between the cis and trans isomeric forms was detected for the thiacarbocyanine dyes in a number of organic solvents, with a shift of the equilibrium toward the cis-isomer caused by an increase in the solvent polarity. The oxacarbocyanines are present only in the form of trans-isomers in both polar and nonpolar solvents. Interaction of the dyes with DNA leads to the formation of stable noncovalent complexes. The complexation of the thiacarbocyanine dyes results in a shift of the isomeric equilibrium and occurs predominantly via the cis-form of the dye. The oxacarbocyanine dyes produce complexes with DNA in the initial trans-form.__________Translated from Khimiya Vysokikh Energii, Vol. 39, No. 4, 2005, pp. 280–286.Original Russian Text Copyright © 2005 by Pronkin, Tatikolov, Anikovskii, Kuz’min. |
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