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气相环境下丙氨酸Ca2+配合物的手性转变机理及水分子的催化作用
引用本文:徐锐英,刘芳,马宏源,张雪娇,潘宇,杨晓翠,王佐成.气相环境下丙氨酸Ca2+配合物的手性转变机理及水分子的催化作用[J].浙江大学学报(理学版),2021,47(5):630-641.
作者姓名:徐锐英  刘芳  马宏源  张雪娇  潘宇  杨晓翠  王佐成
基金项目:吉林省科技发展计划自然科学基金项目(20130101308JC; 20160101308JC).
摘    要:采用基于密度泛函理论的M06方法,研究了气相环境下2种稳定构型的丙氨酸(Ala)与Ca2+配合物的手性转变及水分子的催化。研究发现,Ala_1·Ca2+的手性转变有a和b 2个通道,a通道是α-氢只以羰基氧为桥迁移;b通道是α-氢迁移到羰基氧后,氨基上的质子在纸面内侧向α-碳迁移。Ala_2·Ca2+的手性转变有a、b、c、d 4个通道,a和b通道分别是羧基内质子迁移后,α-氢只以羰基氧为桥迁移和α-氢迁移到羰基氧接质子从氨基氮向α-碳迁移;c通道是钙与氮的配位键断裂后,α-氢向氨基氮迁移;d通道是钙与氮的配位键断裂后,Ala_2·Ca2+向Ala_1·Ca2+异构,再接Ala_1·Ca2+的手性转变。势能面计算表明,Ala_1·Ca2+手性转变的a通道具有优势,总包能垒为134.8 kJ·mol-1,Ala_2·Ca2+手性转变的d通道具有优势,总包能垒为235.3 kJ·mol-1;水分子的催化使能垒分别降至40.8和141.3 kJ·mol-1。结果表明,Ca2+对Ala的手性转变具有催化作用,水分子对丙氨酸Ca2+配合物的手性转变具有极好的催化作用。

关 键 词:丙氨酸  钙离子(Ca2+  手性转变  密度泛函理论  过渡态  能垒  
收稿时间:2019-11-16

Chiral transition mechanism of Ala and Ca2+ complexes in gas phase and catalysis of water molecules
XU Ruiying,LIU Fang,MA Hongyuan,ZHANG Xuejiao,PAN Yu,YANG Xiaocui,WANG Zuocheng.Chiral transition mechanism of Ala and Ca2+ complexes in gas phase and catalysis of water molecules[J].Journal of Zhejiang University(Sciences Edition),2021,47(5):630-641.
Authors:XU Ruiying  LIU Fang  MA Hongyuan  ZHANG Xuejiao  PAN Yu  YANG Xiaocui  WANG Zuocheng
Institution:1.Theoretical Computing Center, Baicheng Normal University, Baicheng 137000, Jilin Province,China
2.Communication College, Baicheng Normal University, Baicheng 137000, Jilin Province, China
3.College of Physics, Baicheng Normal University, Baicheng 137000, Jilin Province, China
Abstract:The catalysis of water molecules and the chiral transition of two stable configurations of alanine (Ala) and Ca2+ complexes in gas phase have been studied using the M06 method based on density functional theory. The study shows that the Ala_1·Ca2+ chiral transition has two pathways a and b. In pathway a, α-H is transferred merely using carbonyl O atom as a bridge. In pathway b, the proton on the amino group transfers to α-C from inside paper after α-H is transferred to carbonyl O atom. The Ala_2·Ca2+ chiral transition has four pathways a, b, c and d. In pathway a, α-H is transferred merely using carbonyl O atom as a bridge after the transition of proton on the carboxyl group. In pathway b, α-H is transferred to carbonyl O atom and then proton transfers from the amino group N atom to α-C after the transition of proton on the carboxyl group. In pathway c, α-H is transferred to the amino group N atom after the coordination bond between calcium and nitrogen is broken. In pathway d, the coordination bond between calcium and nitrogen is broken and Ala_2·Ca2+ is isomerized to Ala_1·Ca2+, then Ala_1·Ca2+ achieves the chiral transition. The potential energy surface calculation shows that the dominant pathway of the chiral transition of Ala_1·Ca2+ is pathway a, and the total energy barrier is 134.8 kJ·mol-1. The dominant pathway of the chiral transition of Ala_2·Ca2+ is pathway d, and the total energy barrier is 235.3 kJ·mol-1. The catalysis of water molecules then reduces them to 40.8 kJ·mol-1 and 141.3 kJ·mol-1 respectively. The results show that Ca2+ has a catalytic effect on the chiral transition of Ala, and water molecule has an excellent catalytic effect on the chiral transition of Ala and Ca2+ complexes.
Keywords:α-alanin(Ala)  Ca2+  chiral transition  density functional theory  transition state  energy barrier  
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