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Quadrature Methods for Bayesian Optimal Design of Experiments With Nonnormal Prior Distributions
Authors:Peter Goos  Kalliopi Mylona
Institution:1. Faculty of Bioscience Engineering and Leuven Statistics Research Centre, KU Leuven, Leuven, Belgium;2. Faculty of Applied Economics and StatUa Center for Statistics, Universiteit Antwerpen, Antwerpen, Belgium;3. Department of Statistics, Universidad Carlos III de Madrid, Getafe, Madrid, Spain;4. Department of Mathematics, King’s College London, London, UK;5. Southampton Statistical Sciences Research Institute, University of Southampton, Southampton, England, UK
Abstract:Many optimal experimental designs depend on one or more unknown model parameters. In such cases, it is common to use Bayesian optimal design procedures to seek designs that perform well over an entire prior distribution of the unknown model parameter(s). Generally, Bayesian optimal design procedures are viewed as computationally intensive. This is because they require numerical integration techniques to approximate the Bayesian optimality criterion at hand. The most common numerical integration technique involves pseudo Monte Carlo draws from the prior distribution(s). For a good approximation of the Bayesian optimality criterion, a large number of pseudo Monte Carlo draws is required. This results in long computation times. As an alternative to the pseudo Monte Carlo approach, we propose using computationally efficient Gaussian quadrature techniques. Since, for normal prior distributions, suitable quadrature techniques have already been used in the context of optimal experimental design, we focus on quadrature techniques for nonnormal prior distributions. Such prior distributions are appropriate for variance components, correlation coefficients, and any other parameters that are strictly positive or have upper and lower bounds. In this article, we demonstrate the added value of the quadrature techniques we advocate by means of the Bayesian D-optimality criterion in the context of split-plot experiments, but we want to stress that the techniques can be applied to other optimality criteria and other types of experimental designs as well. Supplementary materials for this article are available online.
Keywords:Bayesian optimal design  Beta distribution  D-optimality  Gamma distribution  Log-normal distribution  Numerical integration
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