vdW-TSSCDS—An automated and global procedure for the computation of stationary points on intermolecular potential energy surfaces |
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Authors: | Sabine Kopec Emilio Martínez-Núñez Juan Soto Daniel Peláez |
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Institution: | 1. Université de Lille, CNRS, UMR 8523 - PhLAM - Physique des Lasers Atomes et Molécules, Lille, France;2. Departamento de Química Física, Facultade de Química, Campus Vida, Universidade de Santiago de Compostela, Santiago de Compostela, Spain;3. Department of Physical Chemistry, Faculty of Sciences, University of Málaga, Málaga, Spain |
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Abstract: | We present a generalization of the transition state search using chemical dynamics simulations (TSSCDS) methodology (discussed in a previous study) which allows the topographical characterization of intermolecular potential energy surfaces (IPES) for non-covalently bound complexes (vdW-TSSCDS). Starting from a single random input geometry, we show that vdW-TSSCDS is able to globally and automatically locate stationary points of an IPES, even in limiting cases such as extremely flat regions or nontrivial topologies (eg, bifurcation points). The basic idea is the expression of the connectivity matrix in block structure, where diagonal blocks correspond to the isolated fragments and off-diagonal blocks provide the intermolecular connectivity. To this end, we introduce a new definition of bound or not, in a non-covalent sense, utilizing an extra set of van der Waals distances, which encompasses all kinds of non-covalent distances. To discuss the use of the vdW-TSSCDS method, we present a series of 2-body van der Waals systems, namely, Ar-Benzene (3D), N2-Benzene (6D) and H2O-Benzene (9D). Finally, we further illustrate its capabilities by presenting some applications for n-body problems (n > 2), (H2O)2-Benzene (12D) and (H2O)3-Benzene (21D), as well as to a reactive, fully-flexible, system (Benzene-NO2)+ (39D) in which the simultaneous breaking/formation of both covalent and non-covalent interactions takes place. |
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Keywords: | automated algorithm global characterization intermolecular potential energy surface non-covalent systems topography |
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