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Interactions of DNA with graphene and sensing applications of graphene field-effect transistor devices: A review
Authors:Nathaniel S. GreenAuthor Vitae  Michael L. Norton
Affiliation:Department of Chemistry, Marshall University, One John Marshall Drive, Huntington, WV 25755, United States
Abstract:Graphene field-effect transistors (GFET) have emerged as powerful detection platforms enabled by the advent of chemical vapor deposition (CVD) production of the unique atomically thin 2D material on a large scale. DNA aptamers, short target-specific oligonucleotides, are excellent sensor moieties for GFETs due to their strong affinity to graphene, relatively short chain-length, selectivity, and a high degree of analyte variability. However, the interaction between DNA and graphene is not fully understood, leading to questions about the structure of surface-bound DNA, including the morphology of DNA nanostructures and the nature of the electronic response seen from analyte binding. This review critically evaluates recent insights into the nature of the DNA graphene interaction and its affect on sensor viability for DNA, small molecules, and proteins with respect to previously established sensing methods. We first discuss the sorption of DNA to graphene to introduce the interactions and forces acting in DNA based GFET devices and how these forces can potentially affect the performance of increasingly popular DNA aptamers and even future DNA nanostructures as sensor substrates. Next, we discuss the novel use of GFETs to detect DNA and the underlying electronic phenomena that are typically used as benchmarks for characterizing the analyte response of these devices. Finally, we address the use of DNA aptamers to increase the selectivity of GFET sensors for small molecules and proteins and compare them with other, state of the art, detection methods.
Keywords:GFET, graphene field-effect transistor   CVD, chemical vapor deposition   2D, two-dimensional   DNA, deoxyribonucleic acid   SMFS, single molecule force microscopy   ssDNA, single-stranded deoxyribonucleic acid   AFM, atomic force microscopy   dsDNA, double-stranded deoxyribonucleic acid   PDGF, platelet derived growth factor   SAMs, self-assembled monolayers   HOPG, highly ordered pyrolytic graphite   SA, streptavidin   GO, graphene oxide   RIE, reactive ion etching   rGO, reduced graphene oxide   XPS, X-ray photoelectron spectroscopy   NrGO, nitrogen doped graphene oxide   VCNP, conductance neutral point   LOD, limit of detection   GCE, glassy carbon electrode   ppm, parts per million   ppb, parts per billion   MIPK, methyl isopropyl ketone   CMUT, capacitive micromachined ultrasonic transducer   DMMP, dimethyl methylphosphonate   ATP, adenosine triphosphate   TMN, tris magnesium sodium buffer   PBS, phosphate buffered saline   DPV, differential pulse voltammetry   SERS, surface enhanced Raman spectroscopy   FET, field-effect transistor   PA, protective antigen   pI, isoelectric point   PBASE, pyrenebutanoic acid succinimidyl ester   TBA, thrombin binding aptamer   DAN, 1,5-diaminonapthalene   VGEF, vascular endothelial growth factor   MES, 2-(N-morpholino)ethanesulfonic acid   IgE, immunoglobulin E
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