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Modeling Yeast Cell Polarization Induced by Pheromone Gradients
Authors:Tau-Mu Yi  Shanqin Chen  Ching-Shan Chou  Qing Nie
Affiliation:(1) Developmental & Cell Biology, Center for Complex Biological Systems, University of California, Irvine, CA 92697, USA;(2) Center for Mathematical and Computational Biology, Center for Complex Biological Systems, Department of Mathematics, University of California, Irvine, CA 92697, USA
Abstract:
Yeast cells respond to spatial gradients of mating pheromones by polarizing and projecting up the gradient toward the source. It is thought that they employ a spatial sensing mechanism in which the cell compares the concentration of pheromone at different points on the cell surface and determines the maximum point, where the projection forms. Here we constructed the first spatial mathematical model of the yeast pheromone response that describes the dynamics of the heterotrimeric and Cdc42p G-protein cycles, which are linked in a cascade. Two key performance objectives of this system are (1) amplification—converting a shallow external gradient of ligand to a steep internal gradient of protein components and (2) tracking—following changes in gradient direction. We used simulations to investigate amplification mechanisms that allow tracking. We identified specific strategies for regulating the spatial dynamics of the protein components (i.e. their changing location in the cell) that would enable the cell to achieve both objectives.
Keywords:G-protein  polarization  gradient-sensing  spatial dynamics  surface diffusion
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