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Electronic structure and spectroscopic properties of 6‐aminophenanthridine and its derivatives: Insights from density functional theory
Authors:Hakkim Vovusha  Debapriya Banerjee  Nassima Oumata  Biplab Sanyal  Suparna Sanyal
Affiliation:1. Department of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden;2. Department of Physics and Astronomy, Uppsala University, Uppsala, Sweden;3. ManRos Therapeutics, Centre de Perharidy, Roscoff, Bretagne, France
Abstract:6‐Aminophenanthridine (6AP) and its derivatives show important biological activities as antiprion compounds and inhibitors of the protein folding activity of the ribosome. Both of these activities depend on the RNA binding property of these compounds, which has been recently characterized by fluorescence spectroscopy. Hence, fundamental insights into the photophysical properties of 6AP compounds are highly important to understand their biological activities. In this work, we have calculated electronic structures and optical properties of 6AP and its three derivatives 6AP8CF3, 6AP8Cl, and 6APi by density functional theory (DFT) and time‐dependent density functional theory (TDDFT). Our calculated spectra show a good agreement with the experimental absorption and fluorescence spectra, and thus, provide deep insights into the optical properties of the compounds. Furthermore, comparing the results obtained with four different hybrid functionals, we demonstrate that the accuracy of the functionals varies in the order B3LYP > PBE0 > M062X > M06HF. © 2015 Wiley Periodicals, Inc.
Keywords:density functional theory  time‐dependent density functional theory  electronic transition  fluorescence  excited state
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