Using alpha-helical coiled-coils to design nanostructured metalloporphyrin arrays |
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Authors: | McAllister Karen A Zou Hongling Cochran Frank V Bender Gretchen M Senes Alessandro Fry H Christopher Nanda Vikas Keenan Patricia A Lear James D Saven Jeffery G Therien Michael J Blasie J Kent DeGrado William F |
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Affiliation: | Department of Biochemistry and Molecular Biophysics, Johnson Foundation, School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA. |
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Abstract: | ![]() We have developed a computational design strategy based on the alpha-helical coiled-coil to generate modular peptide motifs capable of assembling into metalloporphyrin arrays of varying lengths. The current study highlights the extension of a two-metalloporphyrin array to a four-metalloporphyrin array through the incorporation of a coiled-coil repeat unit. Molecular dynamics simulations demonstrate that the initial design evolves rapidly to a stable structure with a small rmsd compared to the original model. Biophysical characterization reveals elongated proteins of the desired length, correct cofactor stoichiometry, and cofactor specificity. The successful extension of the two-porphyrin array demonstrates how this methodology serves as a foundation to create linear assemblies of organized electrically and optically responsive cofactors. |
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