Relaxation Property and Stability Analysis of the Quasispecies Models |
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Authors: | FEGN Xiao-Li LI Yu-Xiao GU Jian-Zhong ZHUO Yi-Zhong |
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Affiliation: | 1.School of Physical Engineering, Zhengzhou University, Zhengzhou 450052, China;2.Center for Computational and System Biology, Institute of Biophysics,;Chinese Academy of Science, Beijing 100101, China;3.China Institute of Atomic Energy, P.O. Box 275(18), Beijing 102413, China;4.Center of Theoretical Nuclear Physics, National Laboratory of Heavy Ion Accelerator of Lanzhou, Lanzhou 730000, China |
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Abstract: | ![]() The relaxation property of both Eigen model and Crow-Kimura model with a single peak fitness landscape is studied from phase transition point of view. We first analyze the eigenvalue spectra of the replication mutation matrices. For sufficiently long sequences, the almost crossing point between the largest and second-largest eigenvalues locates the error threshold at whichcritical slowing down behavior appears. We calculate the critical exponent in the limit of infinite sequence lengths and compare it with the result from numerical curve fittings at sufficiently long sequences. We find that for both models the relaxation time diverges with exponent 1 at the error (mutation) threshold point. Results obtained from both methods agree quite well. From the unlimited correlation length feature, the first order phase transition isfurther confirmed. Finally with linear stability theory, we show that the two model systems are stable for all ranges of mutation rate. The Eigen model is asymptotically stable in terms of mutant classes, and the Crow-Kimura model is completely stable. |
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Keywords: | relaxation time critical exponent error threshold |
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