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谷氨酰胺与碱金属及碱土金属离子络合物的构象和金属离子亲和势:第一性原理研究
引用本文:庞瑞,带子敬.谷氨酰胺与碱金属及碱土金属离子络合物的构象和金属离子亲和势:第一性原理研究[J].化学物理学报(中文版),2014,27(2):189-199.
作者姓名:庞瑞  带子敬
作者单位:中国科学技术大学物理系,苏州纳米科技协同创新中心,合肥230026
基金项目:ACKNOWLEDGMENTS This work was supported by the National Natural Science Foundation of China (No.11074233 and No.11374272) and the Specialized Research Fund for the Doctoral Program of Higher Education (No.20113402110038 and No.20123402110064)
摘    要:Conformations and reaction energetics are important for understanding the interactions be-tween biomolecules and metal ions. In this work, we report a systematic ab initio study on the conformations and metal ion affinities of glutamine (Gln) binding with alkali and alkaline earth metal ions. An efficient and reliable method of searching low energy conformations of metalated Gln is proposed and applied to the complexes of Gln.M+/++ (M+/++=Li+、Na+、K+、Rb+、Cs+、Be++、Mg++、Ca++、Sr++和Ba++). In addition to all conformers known in literatures, many new important conformations are located, demonstrating the power of the new method and the necessity of the conformational search performed here. The metal coordination modes, relative energies, dipole moments, and equilibrium distribu-tions of all important conformations of Gln.M+/++ are calculated by the methods of B3LYP, BHandHLYP, and MP2. IR spectra and metalation enthalpies and free energies are also pre-sented and compared with the available experiments. The results form an extensive database for systematic examination of the metalation properties of Gln.

关 键 词:构象搜寻方法  络合结构  构型分布  红外光谱  结合能
收稿时间:2013-11-11

Conformations and Metal Ion Affinities of Glutamine Binding with Alkali and Alkaline Earth Metal Cations: an ab initio Study
Rui Pang,Zi-jing Lin.Conformations and Metal Ion Affinities of Glutamine Binding with Alkali and Alkaline Earth Metal Cations: an ab initio Study[J].化学物理学报(中文版),2014,27(2):189-199.
Authors:Rui Pang  Zi-jing Lin
Institution:Department of Physics and Collaborative Innovation Center of Suzhou Nano Science and Technology, University of Science and Technology of China, Hefei 230026, China
Abstract:Conformations and reaction energetics are important for understanding the interactions be- tween biomolecules and metal ions. In this work, we report a systematic ab initio study on the conformations and metal ion affinities of glutamine (Gln) binding with alkali and alkaline earth metal ions. An efficient and reliable method of searching low energy conformations of metalated Gln is proposed and applied to the complexes of Gln.Gln.M^+/++(M+/++=Li^+、Na^+、K^+、Rb^+、Cs^+、Be^++、Mg^++、Ca^++、Sr^++ and Ba^++).. In addition to all conformers known in literatures, many new important conformations are located, demonstrating the power of the new method and the necessity of the conformational search performed here. The metal coordination modes, relative energies, dipole moments, and equilibrium distributions of all important conformations of Gln.M^+/++ are calculated by the methods of B3LYP, BHandHLYP, and MP2. IR spectra and metalation enthalpies and free energies are also presented and compared with the available experiments. The results form an extensive database for systematic examination of the metalation properties of Gln.
Keywords:Conformational search method  Complexation structure  Conformational distribution  IR spectrum  Binding energy
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