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Thiol- and disulfide-modified oligonucleotide monolayer structures on polycrystalline and single-crystal Au(111) surfaces
Authors:Hainer?Wackerbarth  Rodolphe?Marie  Mikala?Grubb  Jingdong?Zhang  Allan?G?Hansen  Ib?Chorkendorff  Claus?B?V?Christensen  Anja?Boisen  Email author" target="_blank">Jens?UlstrupEmail author
Institution:(1) Department of Chemistry, Building 207, Technical University of Denmark, 2800 Lyngby, Denmark;(2) Institute of Micro- and Nanotechnology, Building 345 East, Technical University of Denmark, 2800 Lyngby, Denmark;(3) Department of Physics and Department of Chemical Engineering, ICAT (Interdisciplinary Research Center for Catalysis), Technical University of Denmark, Building 309-312, 2800 Lyngby, Denmark
Abstract:We provide a comprehensive study of single- (ss) and double-strand (ds) oligonucleotides with either 25 or 10 bases or base pairs (bp) immobilized on polycrystalline and single-crystal Au(111) surfaces. The study is based on X-ray photoelectron spectroscopy, cyclic and differential pulse voltammetry, interfacial capacitance data, and electrochemical scanning tunnelling microscopy (in situ STM). The sequences used were the 25-bp sequence from the BRCA1 gene (25-mer), while the 10-bp oligonucleotides contained solely linear adenine and thymine sequences. The oligonucleotides were modified by the dimethoxytrityl group (DMT) via a disulfide group DMT-S-S-ss25-mer and DMT-S-S-ds(AT)10], a pure disulfide group (A10-S-S-T10), or a thiol group HS-ss25-mer and HS-ds-(AT)10], all via a hexamethylene linker. The overall pattern suggests strategies for controlled adsorption of DNA-based molecules and recognition of complementary strands or other molecules.
Keywords:Adsorption  Electrochemistry  Oligonucleotides  Scanning tunnelling microscopy  X-ray photoelectron spectroscopy
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