A monopole mass filter with a hyperbolic V-shaped electrode

In this article we compare the classical monopole mass filter of von Zahn and the monopole mass filter with a hyperbolic V-shaped electrode. The experimental results and those of computer simulation for both mass spectrometers are presented. We show that the replacement of a conventional 90 degrees V-shaped electrode by an electrode with a hyperbolic profile substantially improves the peak shape of any given mass, and increases the mass resolution by a factor of 3-4 and the abundance sensitivity by a factor of 100. The potential of high analytical performance combined with electroforming techniques for electrode manufacture indicate future practical uses of such instruments. Copyright 1999 John Wiley & Sons, Ltd.     

A three body approach to study the structural properties of 2-n halo nuclei and the search for Efimov states

The discovery of neutron rich isotopes of the lightest elements on the neutron drip line exhibiting a halo structure has opened up new vistas in research activities. The novel structural features associated with the halo phenomena have been the subject for extensive theoretical and experimental investigations in recent times. In this talk, I propose to present a broad overview of the recent developments in this field, bringing out the striking features which show that a large number oflight nuclei near the neutron drip line are characterized by a clear separation between a ‘normal’ core nucleus and a loosely bound low density veil of neutrons. Specifically, the two neutron halos offer a natural premises, from a theoretical standpoint, to employ three body techniques for studying their detailed structural properties. A considerable part of the talk will be devoted to report and highlight the results on a number of light halo nuclei such as ¹¹Li, ¹¹Be, ¹⁹B and ²²C on which we have been carrying out investigations employing a simple but realistic three body model. These three body systems which have been termed as ‘Borromean’ (i.e while three body systems are bound, the corresponding binary subsystems on the other hand are unbound) are characterized by large spacial extension and very low separation energy of the neutron. They are, therefore, ideally suited for exploring the possibility of the existence of Efimov states in two neutron halo nuclei. We have recently carried out the three body analyses to predict the possibility of the occurrence of such states on which experimental work at various laboratories is underway.     

Theoretical and experimental studies of biotin analogues that bind almost as tightly to streptavidin as biotin

We have used a newly developed qualitative computational approach, PROFEC (Pictorial Representation of Free Energy Changes), to visualize the areas of the ligand biotin where modifications of its structure might lead to tighter binding to the protein streptavidin. The PROFEC analysis, which includes protein flexibility and ligand solvation/desolvation, led to the suggestion that the pro-9R hydrogen atom of biotin, which is in alpha-position to the CO(2)(-) group, might be changed to a larger group and lead to better binding with streptavidin and avidin. Free energy calculations supported this suggestion and predicted that the methyl analogue should bind approximately 3 kcal/mol more tightly to streptavidin, with this difference coming exclusively from the relative desolvation free energy of the ligand. The PROFEC analysis further suggested little or no improvement for changing the pro-9S hydrogen atom to a methyl group, and great reduction in changing the ureido N-H groups to N-CH(3). Stimulated by these results, we synthesized 9R-methylbiotin and 9S-methylbiotin, and their binding free energies and enthalpies were measured for interaction with streptavidin and avidin, respectively. In contrast to the calculated results, experiments found both 9-methylbiotin isomers to bind more weakly to streptavidin than biotin. The calculated preference for the binding of the 9R- over the 9S-stereoisomer was observed. In addition, 9-methylbiotin is considerably less soluble in water than biotin, as predicted by the calculation, and the 9R isomer is, to our knowledge, thus far the tightest binding analogue of biotin to streptavidin. Subsequently, X-ray structures of the complexes between streptavidin and both 9R- and 9S-methylbiotin were determined, and the structures were consistent with those used in the free energy calculations. Thus, the reason for the discrepancy between the calculated and experimental binding free energy does not lie in unusual binding modes for the 9-methylbiotins.     

An ICSCF investigation of Walsh's rules

The ICSCF method is applied to the calculation of orbital energies as a function of bond angle for several AH₂ molecules. The resulting orbital energy diagrams are quite similar in appearance to the canonical SCF results even though the sum of the ICSCF energies is the SCF energy. The method is also applied to Li₂O, CO₂, HCN and a few AH₃ molecules with similar results. The sum of the ICSCF valence orbital energies generally correlates better with the equilibrium bond angle than does the similar sum of canonical orbital energies.     

Shape resonances in slow electron scattering by aromatic molecules. I. Anthraquinone derivatives

A series of anthraquinone (C(14)O(2)H(8)) derivatives has been studied by means of electron capture negative ion mass spectrometry (ECNI-MS), photoelectron spectroscopy (PES), and AM1 quantum chemical calculations. Mean lifetimes of molecular negative ions M(-.) (MNI) have been measured. The mechanism of long-lived MNI formation in the epithermal energy region of incident electrons has been investigated. A simple model of a molecule (a spherical potential well with the repulsive centrifugal term) has been applied for the analysis of the energy dependence of cross sections at the first stage of the electron capture process. It has been shown that a temporary resonance of MNI at the energy approximately 0.5 eV corresponds to a shape resonance with lifetime 1-2.10(-13) s in the f-partial wave (l = 3) of the incident electron. The next resonant state of MNI at the energy approximately 1.7 eV has been associated with the electron excited Feshbach resonance (whose parent state is a triplet npi* transition). In all cases the initial electron state of the MNI relaxes into the ground state by means of a radiationless transition, and the final state of the MNI is a nuclear excited resonance with a lifetime measurable on the mass spectrometry timescale. Copyright 1999 John Wiley & Sons, Ltd.