Near-Ultraviolet Circular Dichroism and Two-Dimensional Spectroscopy of Polypeptides

A fully quantitative theory of the relationship between protein conformation and optical spectroscopy would facilitate deeper insights into biophysical and simulation studies of protein dynamics and folding. In contrast to intense bands in the far-ultraviolet, near-UV bands are much weaker and have been challenging to compute theoretically. We report some advances in the accuracy of calculations in the near-UV, which were realised through the consideration of the vibrational structure of the electronic transitions of aromatic side chains.     

Electro-absorption and refraction in Fabry-Perot quantum well modulators: a general discussion

Fabry-Perot resonators have long been advocated to improve the limited contrast ratio of multiple quantum well optical modulators used in photonic switches based on self electrooptic effect devices (SEEDs) and in other array based optical interconnection schemes. Using data on field dependent GaAs/AlGaAs quantum well absorption and refraction, we have modelled the reflectivity, modulation depth and contrast ratio of resonant modulators. Our results are generally valid for any quantum well modulator and demonstrate 23the important role played by electro-refraction even in regions of strong absorption. Resonators give large contrast ratios but there are trade-offs in the maximum reflectivity change achievable with Fabry-Perot resonators compared to simple modulators. The model gives the optimum number of quantum wells and reflectivity values required to make a resonator at any wavelength for a given quantum well structure. Understanding the limits of Fabry-Perot quantum well modulator performance is important for their application in symmetric self electrooptic effectiveness for photonic switching where modulation and detection properties are both used and for optical interconnection systems.     

Mesomorphic properties of orthopalladated complexes of laterally substituted azobenzene derivatives, 2-alkoxycarbonyl-4-(4-ethoxyphenylazo)phenyl 4-methoxybenzoates

Homologous series of 2-alkoxycarbonyl-4-(4-ethoxyphenylazo)phenyl 4-methoxybenzoates (L) and their orthopalladated μ-chloro dimers (Pd₂Cl₂L₂) have been synthesized and their thermotropic phase transition behaviour has been characterized. The ligands, L, are three-ring nematogens with their central rings substituted in the 2-position by n-alkyl chains of varied length. The thermal stability of the nematic phases decreases rapidly with increasing side chain length and then levels off as the series is ascended. In every case the mesomorphic phase appears only over a small temperature range (less than 20° C). The orthopalladated species also proved to be nematogenic. Melting and clearing points rise on the average by 87° C and 126° C, respectively, and thus the temperature ranges of the nematic phases are enlarged considerably upon metallation. In relation to the observed stabilization of the nematic phases, particularly of higher homologues, a lath-like molecular structure, in which the side chains of the ligands fill up the clefts of the core part, has been deduced for a Pd2Cl2L2 homologue from its solution ¹H-NMR spectrum.     

Considerations on modelling the market for softwood lumber in the United States

The analysis in this paper looks at two important elements in modelling the market for timber in the United States. First, the issue of directional causality between price and quantity and its implications in a modelling effort is investigated. Second, the extent of the geographic market for timber is discussed and a method of detecting it is suggested. The method for detecting the extent of the geographical market is tractable and can be applied in a straightforward way. Both considerations are applied to the softwood lumber market in the United States.     

Vibrational spectra of molten and aqueous NaClO3 and KClO3

Raman spectra of molten NaClO₃ and KClO₃ and of aqueous solutions of these salts were measured over the frequency interval from 50 to 1200 cm⁻¹|. Infrared emission spectra of the molten chlorates and of chlorate-nitrate mixtures were recorded, and absorption spectra of aqueous sodium and potassium chlorate also were determined. The ν₃(e) and ν₄(e) modes of ClO⁻₃ were split in the molten salt and aqueous solution spectra, and a single, weak band was observed between ca. 80 and 200 cm⁻ in the Raman spectra of molten NaClO₃ and KClO₃.     

Fermi and Coulomb correlations in the 21 S state of the helium isoelectronic sequence

The Fermi and Coulomb holes of the 2¹ S state of the helium isoelectronic sequence are investigated. Several interesting differences between the results obtained and those which might be expected on the basis of the corresponding 2³ S state are pointed out and discussed.     

Modeling the reaction mechanisms for redox regulation of protein tyrosine phosphatase 1B activity

Protein tyrosine phosphatase 1B (PTP1B) functions by removing the phosphoryl group from tyrosinephosphorylated proteins in insulin signaling and metabolism. The regeneration of the active site involves a sulphenylamide intermediate derived from the intrastrand cross-linking between the catalytic serine and the neighboring backbone nitrogen. Two mechanisms have been proposed for the formation of the sulphenylamide intermediate and the subsequent reactivation of the catalytic site. In the current work, the proposed mechanisms have been investigated by the use of density functional theory calculations. Our results suggest that these two mechanisms have similar overall energy barriers and that the preferred route will be determined by the availability of hydrogen peroxide or other oxidizing reagents.