A paper-based resonance energy transfer nucleic acid hybridization assay using upconversion nanoparticles as donors and quantum dots as acceptors

Monodisperse aqueous upconverting nanoparticles (UCNPs) were covalently immobilized on aldehyde modified cellulose paper via reduction amination to develop a luminescence resonance energy transfer (LRET)-based nucleic acid hybridization assay. This first account of covalent immobilization of UCNPs on paper for a bioassay reports an optically responsive method that is sensitive, reproducible and robust. The immobilized UCNPs were decorated with oligonucleotide probes to capture HPRT1 housekeeping gene fragments, which in turn brought reporter conjugated quantum dots (QDs) in close proximity to the UCNPs for LRET. This sandwich assay could detect unlabeled oligonucleotide target, and had a limit of detection of 13 fmol and a dynamic range spanning nearly 3 orders of magnitude. The use of QDs, which are excellent LRET acceptors, demonstrated improved sensitivity, limit of detection, dynamic range and selectivity compared to similar assays that have used molecular fluorophores as acceptors. The selectivity of the assay was attributed to the decoration of the QDs with polyethylene glycol to eliminate non-specific adsorption. The kinetics of hybridization were determined to be diffusion limited and full signal development occurred within 3 min.     

NiO@CuO@Cu bilayered electrode: two-step electrochemical synthesis supercapacitor properties

Present work deals with a two-step synthesis and electrochemical properties of nickel oxide @copper oxide@copper (NiO@CuO@Cu) bilayered electrode. In the first step, anodization (40 V for 25 min) of Cu foil has been carried out for forming Cu-hydroxide@Cu which when annealed at 300 °C for 1 h produces CuO@Cu. In the second step, Ni-hydroxide is deposited onto CuO@Cu by applying current density of 0.03 A/cm² for 3 min which when re-annealed at 300 °C for 1 h gives out NiO@CuO@Cu bilayered electrode. Obtained NiO@CuO@Cu bilayered electrode demonstrates separate CuO and NiO phases. The electrochemical properties have obtained using cyclic voltammetry, galvonostatic charge-discharge, and Nyquist plot measurements that reveal an importance of NiO@CuO@Cu as a potential electrode material in the electrochemical supercapacitor application with 58.14, 51.25, and 4.73 F g^?1 values in 0.5 M, NaOH, KOH, and Na₂SO₄ electrolytes, respectively, measured at 2 mVs^?1 scan rate.     

Thermodynamic analysis of MHD Couette–Poiseuille flow of water-based nanofluids in a rotating channel with radiation and Hall effects

Journal of Thermal Analysis and Calorimetry - This study will focus on the first- and second-law analyses of MHD Couette–Poiseuille flow of water-based nanofluids in a rotating permeable...     

New Numerical Approach for Fractional Variational Problems Using Shifted Legendre Orthonormal Polynomials

This paper reports a new numerical approach for numerically solving types of fractional variational problems. In our approach, we use the fractional integrals operational matrix, described in the sense of Riemann–Liouville, with the help of the Lagrange multiplier technique for converting the fractional variational problem into an easier problem that consisting of solving an algebraic equations system in the unknown coefficients. Several numerical examples are introduced, combined with their approximate solutions and comparisons with other numerical approaches, for confirming the accuracy and applicability of the proposed approach.     

Deposition of ZnS thin film by ultrasonic spray pyrolysis: effect of thickness on the crystallographic and electrical properties

Zinc sulfide (ZnS) thin films have been deposited on Si (1 0 0) substrate using ultrasonic spray pyrolysis. X-ray diffraction (XRD) analysis revealed that the films are (0 0 2) preferentially oriented with c-axis-oriented wurtzite structure. The crystallinity has been found to improve with film thickness in the 180–6000 nm range. Film structure has been analyzed by XRD, scanning electron microscope, FTIR, and Raman spectroscopies, while the stoichiometry has been verified by energy-dispersive spectroscopy and particle-induced X-ray emission techniques. Electrical properties of the grown films were characterized by current–voltage and capacitance–voltage measurements where, the films show better conducting behavior at higher thickness.     

Deciphering the Role of Filamin B Calponin-Homology Domain in Causing the Larsen Syndrome,Boomerang Dysplasia,and Atelosteogenesis Type I Spectrum Disorders via a Computational Approach

Filamins (FLN) are a family of actin-binding proteins involved in regulating the cytoskeleton and signaling phenomenon by developing a network with F-actin and FLN-binding partners. The FLN family comprises three conserved isoforms in mammals: FLNA, FLNB, and FLNC. FLNB is a multidomain monomer protein with domains containing an actin-binding N-terminal domain (ABD 1–242), encompassing two calponin-homology domains (assigned CH1 and CH2). Primary variants in FLNB mostly occur in the domain (CH2) and surrounding the hinge-1 region. The four autosomal dominant disorders that are associated with FLNB variants are Larsen syndrome, atelosteogenesis type I (AOI), atelosteogenesis type III (AOIII), and boomerang dysplasia (BD). Despite the intense clustering of FLNB variants contributing to the LS-AO-BD disorders, the genotype-phenotype correlation is still enigmatic. In silico prediction tools and molecular dynamics simulation (MDS) approaches have offered the potential for variant classification and pathogenicity predictions. We retrieved 285 FLNB missense variants from the UniProt, ClinVar, and HGMD databases in the current study. Of these, five and 39 variants were located in the CH1 and CH2 domains, respectively. These variants were subjected to various pathogenicity and stability prediction tools, evolutionary and conservation analyses, and biophysical and physicochemical properties analyses. Molecular dynamics simulation (MDS) was performed on the three candidate variants in the CH2 domain (W148R, F161C, and L171R) that were predicted to be the most pathogenic. The MDS analysis results showed that these three variants are highly compact compared to the native protein, suggesting that they could affect the protein on the structural and functional levels. The computational approach demonstrates the differences between the FLNB mutants and the wild type in a structural and functional context. Our findings expand our knowledge on the genotype-phenotype correlation in FLNB-related LS-AO-BD disorders on the molecular level, which may pave the way for optimizing drug therapy by integrating precision medicine.     

Uncommon perspectives in palladium- and copper-catalysed arylation and heteroarylation of terminal alkynes following Heck or Sonogashira protocols: Interactions copper/ligand,formation of diynes,reaction and processes in ionic liquids

Conjugated alkynes are recurring building blocks in natural products and in a wide range of important compounds, such as pharmaceuticals, agrochemicals, or molecular materials. The palladium-catalysed cross-coupling reaction between the sp²-hybridized carbon atoms of aryl, heteroaryl, and vinyl halides with the sp-hybridized carbon atoms of terminal alkynes is one of the most important developments in the field of alkyne chemistry over the past 50 years. Room for improvement still exists in these important reactions of direct arylation of terminal alkynes. In this prospect, the present authors have developed several strategies aiming at improving the reactivity, the selectivity, and several aspects of processes involving the palladium-catalysed alkyne arylation and heteroarylation reactions, in relation with sustainable chemistry. Various original approaches have thus been adopted: (i) the development of catalytic systems efficient at low metal loading below 1 mol% of palladium and copper (to reduce metal contamination) from polydentate ligands chemistry, (ii) the limitation of diyne formation by undesired side-reaction, this from a better mechanistic understanding and the innovating use of copper adducts, (iii) and the development of cost-efficient catalytic reactions in ionic liquid solvents. These topics have been developed with the general outlook of a large scope in organic synthesis. In addition, the investigation of recycling opportunities and the unprecedented production of extendedly conjugated bis(aryl)diynes has been also achieved. The present account reviews all this work, as it has been presented by the corresponding author at GECOM–CONCOORD 2012 as recipient of the 2012 European journal of Inorganic Chemistry Young Investigator Award.     

The stiffness of self-similar fractals

A method to derive the stiffness of self-similar elastic fractals is presented based on structural mechanics principles and a physically motivated similarity criterion, which is assumed as a postulate. Using this method, the stiffnesses of both the Von Koch curve and the Sierpiński gasket in the small-deformation regime are derived. For these fractal structures, it is shown that the stiffness matrix is completely determined by a single elastic constant. The procedure to tile a planar domain with Sierpiński gaskets is explored and shown to require the consideration of hexagonal-shaped combinations of gaskets joined continuously along their edges. This continuity leads to a phenomenon of geometrically induced inextensibility along the common edges. After deriving the stiffness matrix for the basic hexagon, the analog of the Boussinesq–Flamant problem for a tiled half-plane is solved numerically to demonstrate the potential of the method in modeling of solid mechanics applications.     

Robust improvement schemes for road networks under demand uncertainty

This paper is concerned with development of improvement schemes for road networks under future travel demand uncertainty. Three optimization models, sensitivity-based, scenario-based and min–max, are proposed for determining robust optimal improvement schemes that make system performance insensitive to realizations of uncertain demands or allow the system to perform better against the worst-case demand scenario. Numerical examples and simulation tests are presented to demonstrate and validate the proposed models.     

Innovative beneficial reuse of reverse osmosis concentrate using bipolar membrane electrodialysis and electrochlorination processes

Reverse osmosis (RO) is a widely used and rapidly growing desalination technology. A major disadvantage of this process is that the concentrate from the RO process, which could be as much as 25% of the feed stream, represents a polluting stream. This waste stream could pose a significant challenge to the implementation of this process, particularly for inland communities which do not have the option of ocean disposal. An excellent environmentally benign approach to disposal could be beneficial reuse of the waste stream. This study presents two innovative beneficial reuse strategies for RO concentrate produced by an integrated membrane system (IMS) from a wastewater reclamation facility. The technologies evaluated in this study included bipolar membrane electrodialysis (BMED) for conversion of RO concentrate into mixed acid and mixed base streams, and electrochlorination (EC) for onsite chlorine generation. Bench-scale studies conducted with BMED demonstrated that RO concentrate could be desalted while producing mixed acids and mixed bases with concentrations as high as 0.2N. Similarly, the EC process was capable of producing a 0.6% hypochlorite solution from RO concentrate. The acids and bases as well as the hypochlorite produced could be directly applied to the RO process as well as upstream pre-treatment processes. A preliminary economic evaluation of the viability of these two approaches was conducted by conducting rough order of magnitude cost estimates based on the bench-scale performance of these processes on RO concentrate. A comparison of the overall costs of an Integrated Membrane System utilizing these innovative reuse strategies with conventional disposal options and thermal zero liquid discharge treatment is presented. This comparison indicates that a reuse approach might be economically viable for inland wastewater reuse facilities that utilize RO membranes and have limited options for concentrate disposal.