Sequestration within biomolecular condensates inhibits Aβ-42 amyloid formation

Biomolecular condensates are emerging as an efficient strategy developed by cells to control biochemical reactions in space and time by locally modifying composition and environment. Yet, local increase in protein concentration within these compartments could promote aberrant aggregation events, including the nucleation and growth of amyloid fibrils. Understanding protein stability within the crowded and heterogeneous environment of biological condensates is therefore crucial, not only when the aggregation-prone protein is the scaffold element of the condensates but also when proteins are recruited as client molecules within the compartments. Here, we investigate the partitioning and aggregation kinetics of the amyloidogenic peptide Abeta42 (Aβ-42), the peptide strongly associated with Alzheimer''s disease, recruited into condensates based on low complexity domains (LCDs) derived from the DEAD-box proteins Laf1, Dbp1 and Ddx4, which are associated with biological membraneless organelles. We show that interactions between Aβ-42 and the scaffold proteins promote sequestration and local increase of the peptide concentration within the condensates. Yet, heterotypic interactions within the condensates inhibit the formation of amyloid fibrils. These results demonstrate that biomolecular condensates could sequester aggregation-prone proteins and prevent aberrant aggregation events, despite the local increase in their concentration. Biomolecular condensates could therefore work not only as hot-spots of protein aggregation but also as protective reservoirs, since the heterogenous composition of the condensates could prevent the formation of ordered fibrillar aggregates.

Biomolecular condensates sequester an aggregation-prone peptide and prevent its aggregation, showing that heterotypic interactions within the condensates can prevent the formation of amyloid fibrils, despite the local increase in concentration.     

Microsolvation of the [Ni(acac)(tmen)]+ complex

Microsolvation of the [Ni(acac)(tmen)]⁺ complex by a series of aliphatic n-alcohols (Solv) has been studied in ClCH₂CH₂Cl solutions by spectrophotometry. Based on the changes in the electronic spectrum of the afore-mentioned complex, observed under the influence of any alcohol, the equilibrium constants for the formation of the [Ni(acac)(tmen)Solv]⁺ and [Ni(acac)(tmen)Solv₂]⁺ species have been computed according to the algorithm presented in this work. It was found that, in all the systems studied, the stability of five-coordinated [Ni(acac)(tmen)Solv]⁺ is higher than that of octahedral [Ni(acac)(tmen)Solv₂]⁺. The resulting values are discussed in terms of the Lewis basicity of alcohols.     

ICP-MS determination of heavy metals in submerged cultures of wood-rotting fungi

Accumulation of five heavy metal ions by five species of wood-rotting basidiomycetes during a 9-day cultivation was studied. Contents of Cd, Cu, Pb, and Zn were measured using ICP-MS; the amount of mercury was determined directly in solid samples using the Advanced Mercury Analyser. A standard operation procedure for the sample preparation and determination of metal content was developed and validated. Presence of Cd, Cu, Hg, and Pb decreased the accumulation of zinc by the fungi. The basidiomycete Pycnoporus cinnabarinus exhibited the highest metal binding capacity of all fungi tested.     

Glass capillary columns for separation of free organic acids

Glass capillary columns have been prepared without acidic additive in the stationary phase, from which free organic acids elute as sharp and symmetrical peaks. The required surface in the borosilicate glass capillary was generated by a combination of leaching with aqueous HCl and deposition of colloidal silica particles; it can be coated with stationary phases have a broad range of polarity. Aqueous samples containing free organic acids can also be analyzed in such columns in an isothermal mode.     

Affinity chromatography of porcine pepsin A using quinolin-8-ol as ligand

Stationary phase containing quinolin-8-ol immobilized on macroporous methacrylate support for the affinity chromatography of porcine pepsin A is described. Optimized chromatographic conditions for separation of porcine pepsin A on this stationary phase were found investigating the influence of pH, concentration, ionic strength and chemical composition of the used mobile phases. The stationary phase shows a good reproducibility of chromatographic analyses (relative standard deviation, +/-2%), a high recovery (ca. 93%) and a satisfactory capacity (13 mg pepsin A/1 mL stationary phase) for porcine pepsin A. The obtained findings confirm the applicability of affinity chromatography on the stationary phase with immobilized quinolin-8-ol to the isolation and determination of porcine pepsin A.     

Photopolymerization initiated by charge-transfer complex. I. Photopolymerization of methylmethacrylate with the use of quinaldine-bromine and lutidine–bromine charge-transfer complexes as photoinitiator

Photopolymerization of MMA was carried out with quinaldine–bromine (QN–Br₂) and lutidine–bromine (LU–Br₂) charge-transfer complexes as initiators. The rate of polymerization R_p increased with rising monomer concentration and the monomer exponent was computed as unity. At first the rate of polymerization accelerated and then reduced as the initiator concentration was increased. The initiator exponent was 0.5. The reaction was carried out at three different temperatures and overall activation energy was calculated at 4.0 kcal/mol. The kinetic data and other evidence indicate that the overall polymerization takes place in a radical mechanism. A suitable mechanism is suggested.     

Structural analysis of 2,6-[bis(alkyloxy)methyl]-phenyltin derivatives using electrospray ionization mass spectrometry

Electrospray ionization (ESI) mass spectrometry was applied to the structural analysis of 23 2,6-[bis(alkyloxy)methyl]phenyltin(IV) derivatives. The mass spectra were measured in both polarity modes and multistage tandem mass spectrometric (MS(n)) measurements were performed on the ion trap analyser for positively charged tin-containing ions. The sum of complementary ions observed in the positive-ion mode (i.e. [M-R(3)](+) ion) and in the negative-ion mode (i.e. [R(3)](-) ion) permits molecular mass determination in spite of the fact that the molecular adducts were often missing even in the first-order mass spectra. The subsequent fragmentation of [M-R(3)](+) ions studied by MS(n) and the correlation of observed fragment ions with the expected structures of synthesized organotin(IV) compounds allowed us to understand the fragmentation behaviour and the mechanism of the ion formation for studied compounds. The typical neutral losses are alkenes, alcohols and aldehydes. The fragmentation pattern of one selected compound was supported by MS(n) measurements of an isotopically labelled analogue to confirm unusual ion-molecule reactions of some fragment ions with water in the ion trap.     

Aqueous polymerization of acrylonitrile initiated by the bromate–thiourea redox system

The aqueous polymerization of acrylonitrile initiated by an acidified bromate–thiourea redox system has been studied under nitrogen atmosphere. The rate of polymerization is independent of thiourea concentration over the range 2–9 × 10^?3M and reaches maximum at 9 × 10^?3M. The rate varies linearly with [monomer]. The initial rate of polymerization as well as the maximum conversion increases within the range of 4–22.5 × 10^?3M KBrO₃, but beyond 22.5 × 10^?3M the rate of polymerization decreases. The initial rate and the limiting conversion increases with increasing polymerization temperature in the range 30–45°C; and beyond 45°C they decrease. The effect of certain neutral salts, water-soluble solvents, and micelles of cationic, anionic, and nonionic surfactants on the rate of polymerization has been investigated.     

Grafting Vinyl Monomers onto Wool Fibers. VII. Graft Copolymerization of Methyl Methacrylate onto Wool Using Peroxydiphosphate-Thiourea Redox System

Graft copolymerization of methyl methacrylate onto wool was investigated in aqueous solution using the potassium peroxy-diphosphate-thiourea redox system as the initiator. The rate of grafting was determined by varying the monomer, peroxydi-phosphate ion, temperature, and solvent. The graft yield increases with increasing peroxydiphosphate ion up to 80 × 10^?-⁴ mol/L, and with further increase of peroxydiphosphate ion the graft yield decreases. The graft yield increases with increasing monomer concentration. The percentage of grafting decreases with increasing thiourea concentration. The rate of grafting increases with an increase of temperature. The effect of acid and water-soluble solvent and certain salts on graft yield has been investigated and a suitable rate expression has been derived.