Dynamic scanning force microscopy study of self-assembled DNA-protein nanostructures

Self-assembled oligomeric nanostructures consisting of bisbiotinylated DNA fragments connected by the protein streptavidin (STV) are studied by dynamic scanning force microscopy (SFM) operating in air. A comparison of the images taken in repulsive and attractive regimes is systematically made on DNA and STV structures. Stable and reproducible SFM images are obtained in the attractive regime by using a special feedback circuit, called Q-control. On the other hand, when SFM is operating in the repulsive regime, deformation of the structures that reduce the resolution and the image quality are clearly observable. The heights of both DNA and STV have been measured as a function of the tip/molecule interaction forces. This study offers the possibility to suggest a different mechanical behavior of DNA with respect to STV. Received: 24 July 2001 / Accepted: 3 December 2001 / Published online: 4 March 2002     

Mayberry-Murasugi's formula for links in homology 3-spheres

We prove the Mayberry-Murasugi formula for links in homology 3-spheres, which was proved before only for links in the 3-sphere. Our proof uses Franz-Reidemeister torsions.

     

Nonadiabatic geometric phase in quaternionic Hilbert space

We develop the theory of the nonadiabatic geometric phase, in both the Abelian and non-Abelian cases, in quaternionic Hilbert space.     

Synthesis and thermal crosslinking of oxazolidine‐functionalized polyurethanes

A new oxazolidine derivative was obtained from phenol, 2‐amino‐2‐methylpropane‐1,3‐diol and paraformaldehyde. The reaction of this novel oxazolidine diol with phenylisocyanate lead to a urethane model compound which can be polymerized thermally by oxazolidine ring opening to give a Mannich bridge structure. Linear segmented polyurethanes were prepared by reaction of different ratios of oxazolidine diol and commercial polyethylenglycol (M_w ～ 400) with 4,4′‐methylenbis (cyclohexylisocyanate) (HMDI, 90% isomers mixture). The polyurethanes were thermally characterized and crosslinked by oxazolidine ring opening to obtain materials which showed improved thermal stability. © 2007 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 45: 4965–4973, 2007     

Optimal Algorithms for Probabilistic Solitude Detection on Anonymous Rings

Probabilistic algorithms are developed for a basic problem in distributed computation, assuming anonymous, asynchronous, unidirectional rings of processors. The problem, known as Solitude Detection, requires that a nonempty subset of the processors, calledcontenders, determine whether or not there is exactly one contender. Monte Carlo algorithms are developed that err with probability bounded by a specified parameter and exhibit either message or processor termination. The algorithms transmit an optimal expected number of bits, to within a constant factor. Their bit complexities display a surprisingly rich dependence on the kind of termination exhibited and on the processors' knowledge of the size of the ring. Two probabilistic tools are isolated and then combined in various ways to achieve all our algorithms.     

Rheological and diffusion properties of a dextran-con A polymer in the presence of Insulin and Magnesium

Previous work carried out in our laboratories has focused on the formation and investigation of a dextran and concanavalin A (con A) based gel, which has the ability to alter its conformational structure in the presence and absence of free and terminal glucoses such that a gel–sol phase transition occurs. Here we report the diffusion and rheological investigations in to the effects of the addition of insulin and varyingconcentrations of magnesium chloride hexahydrate (Mg₂Cl₂6H₂O) at 20 and 37 °C. Rheological examination of glucose-sensitive (dextran-con A) gels were conducted using a cone and plate viscometer used in continual rotation and oscillatory modes. The results are interpreted in terms of the structure of the gel network and suggest rheological assessment provides an effective method of assessing the properties of gel systems. The subsequent testing of such formulations in in-vitro diffusion experiments revealed a reduction in the rate of diffusivity in the insulin marker, poly R-478 dye. The performance of this self-regulating drug delivery system has been examined and the addition of insulin and magnesium chloride may alter the way in which the gel operates as a drug delivery device and in the delivery of insulin. This may have implications for other ligands.     

Fractal porous media III: Transversal Stokes flow through random and Sierpinski carpets

The transversal Stokes flow of a Newtonian fluid through random and Sierpinski carpets is numerically calculated and the transversal permeability derived. In random carpets derived from site percolation, the average macroscopic permeability varies as (- _c)^3/2, close to the critical porosity _c. This exponent is found to be slightly different from the conductivity exponent. Results for Sierpinski carpets are presented up to the fourth generation. The Carman equation is not verified in these two model porous media.