Challenges in the structural characterization of thin organic films

This review addresses the special problems associated with the micro-structural characterization of thin and ultrathin organic films, primarily by optical spectroscopies. Films which are deposited by Langmuir-Blodgett techniques, self-assembly chemistry, and bulk film deposition techniques are considered. The use of enhanced optical excitation using surface phasma resonances and integrated optical structures is discussed extensively, as is the use of ellipsometry. Discussion of the spectroscopies used is broken into a section on electronic spectroscopies and an extensive discussion of vibrational spectroscopies. Vibrational information may be obtained with photons (absorption or scattering) or electrons (loss spectra), and the types of experimental systems amenable to each, along with the advantages and disadvantages of each are explored.     

Anisotropic hydrogel thickness gradient films derivatized to yield three-dimensional composite materials

We report the preparation of in-plane density gradients of amino-terminated molecules and gold particles through derivatization of laterally varying thickness gradients of poly(acrylic acid) (PAA) or poly(acrylamide) (PAAm) films. PAA and PAAm gradients were formed by Zn(II)-catalyzed electropolymerization of acrylic acid (AA) or acrylamide (AAm) in the presence of an in-plane electrochemical potential gradient applied to Au or indium-tin-oxide (ITO) working electrodes. PAA thickness gradients were converted into density gradients of fluorocarbons or biocompatible groups by derivatizing with NH(2)CH(2)(CF(2))(6)CF(3) or an Arg-Gly-Asp (RGD)-containing peptide, respectively. X-ray photoelectron spectroscopy (XPS) and XPS imaging were used to characterize the modified PAA gradients. Transition regions as narrow as 104 mum were achieved for fluorocarbon gradients. PAAm gradients were treated with gold particles to form a density gradient of gold particles. Surface plasmon resonance imaging and scanning electron microscopy (SEM) as well as UV-visible absorption measurements were used to characterize the gold particle density gradients. It is likely that the gold particles were attached both on the surface and inside the PAAm film.     

Structural materials: metal-silicon-Boron. The Nb-rich corner of the Nb-Si-B system

Phase equilibria in the Nb-Nb₅Si₃-NbB region were studied in the melting (crystallization) range by means of light microscopy, XRD, SEM and EMPA on alloys after arc-melting and annealing at 1800°C and at subsolidus temperatures. Phase transition and melting temperatures were determined by DTA and pyrometric Pirani-Alterthum technique resulting in a solidus projection and two isopleths, Nb₇₇Si₂₃-Nb₇₇B₂₃ and Nb₉₉Si₁-Nb₅Si₂B. The T₂-phase Nb₅Si_3−xB_x (0?x?2, Cr₅B₃-type) was found to form equilibria with (Nb), NbB, Nb₃Si, and with the T₁-phase (Mn₅Si₃ derivative type). The T₂-phase melts incongruently (Nb₅Si_1.8B_1.2 at 2245°C) and forms a quasibinary eutectic with the niobium solid solution on a minimum tie-line at ∼1880°C.     

The Dienone–Phenol Rearrangement of Santonin: A Comprehensive Laboratory Experiment for Advanced Undergraduate Organic Chemistry Students

A comprehensive laboratory experiment suitable for advanced undergraduate organic chemistry students has been designed. The experiment is based on the dienone-phenol rearrangement reaction of the sesquiterpene santonin to give -desmotroposantonin acetate. It challenges students to solve an earlier controversial stereochemical problem. The students carry out the reaction and analyze spectroscopic data to determine the stereochemistry of the starting material and the product. In addition, they perform simple molecular modeling calculations, which enable them to rationalize the stereochemical outcome of the transformation and discuss the mechanism of the dienone-phenol rearrangement and related rearrangements reported in the literature.     

Microwave spectrum and rotational isomers of ethyl fluoroformate

The microwave spectrum of ethyl fluoroformate displays strong a-type R branch transitions from two rotameric forms. One species (extended form) has rotational constants A₀ = 9191.3(9) MHz, B₀ = 2112.61(1) MHz, C₀ = 1756.73(1) MHz which are consistent with a syn-anti (τ₁(OCOC) = 0°, r₂(cocc) = 180°) planar heavy atom structure. The second species (compact form) has rotational constants A₀ = 7760(3) MHz, B₀ = 2388.38(4) MHz, C₀ = 2102.47(3) MHz which are consistent with a syn-gauche (τ₁(ococ) = 0°, τ₂(cocc) ˜ 90°) structure. The two conformational forms have approximately equal energy (0 ± 40 cm⁻¹). Four vibrational satellites of the extended species have been analyzed yielding a torsional frequency around the O-ethyl bond of 70(10) cm⁻¹. Three vibrational satellites attributed to the O-ethyl torsion of the compact species have been analyzed yielding a vibrational frequency of 90(10) cm⁻¹. Approximate Fourier coefficients of a three term potential function for internal rotation about the O-ethyl bond have been determined. Vibrational satellites attributed to the first excited states of the O-ester torsion have been analyzed for both conformers. The torsional vibrational frequency around the O-ester bond is 110(15) cm⁻¹ for the extended conformers and 120(20) cm⁻¹ for the compact.     

Acid–base chemistry at the single ion limit

We present the results of acid–base experiments performed at the single ion (H⁺ or OH⁻) limit in ∼6 aL volume nanopores incorporating electrochemical zero-mode waveguides (E-ZMWs). At pH 3 each E-ZMW nanopore contains ca. 3600H⁺ ions, and application of a negative electrochemical potential to the gold working electrode/optical cladding layer reduces H⁺ to H₂, thereby depleting H⁺ and increasing the local pH within the nanopore. The change in pH was quantified by tracking the intensity of fluorescein, a pH-responsive fluorophore whose intensity increases with pH. This behavior was translated to the single ion limit by changing the initial pH of the electrolyte solution to pH 6, at which the average pore occupancy 〈n〉_pore ∼3.6H⁺/nanopore. Application of an electrochemical potential sufficiently negative to change the local pH to pH 7 reduces the proton nanopore occupancy to 〈n〉_pore ∼0.36H⁺/nanopore, demonstrating that the approach is sensitive to single H⁺ manipulations, as evidenced by clear potential-dependent changes in fluorescein emission intensity. In addition, at high overpotential, the observed fluorescence intensity exceeded the value predicted from the fluorescence intensity-pH calibration, an observation attributed to the nucleation of H₂ nanobubbles as confirmed both by calculations and the behavior of non-pH responsive Alexa 488 fluorophore. Apart from enhancing fundamental understanding, the approach described here opens the door to applications requiring ultrasensitive ion sensing, based on the optical detection of H⁺ population at the single ion limit.

Visualizing dynamic change in the number of protons during electroreduction of protons in attoliter volume zero-mode waveguides.     

2D difference gel electrophoresis reference map of a Fusarium graminearum nivalenol producing strain

Fusarium graminearum is widely studied as a model for toxin production among plant pathogenic fungi. A 2D DIGE reference map for the nivalenol‐producing strain 453 was established. Based on a whole protein extract, all reproducible spots were systematically picked and analyzed by MALDI‐TOF/TOF, leading to the identification of 1102 protein species. The obtained map contributes to the annotation of the genome by identifying previously nondescribed hypothetical proteins and will serve as a reference for future studies aiming at deciphering F. graminearum biology and chemotype diversity.     

p-Wave Feshbach molecules

We have produced and detected molecules using a p-wave Feshbach resonance between 40K atoms. We have measured the binding energy and lifetime for these molecules and we find that the binding energy scales approximately linearly with the magnetic field near the resonance. The lifetime of bound p-wave molecules is measured to be 1.0+/-0.1 ms and 2.3+/-0.2 ms for the ml=+/-1 and ml=0 angular momentum projections, respectively. At magnetic fields above the resonance, we detect quasibound molecules whose lifetime is set by the tunneling rate through the centrifugal barrier.     

Structure, scaling, and phase transition in the optimal transport network

The structure and properties of optimal networks depend on the cost functional being minimized and on constraints to which the minimization is subject. We show here two different formulations that lead to identical results: minimizing the dissipation rate of an electrical network under a global constraint is equivalent to the minimization of a power-law cost function introduced by Banavar et al. [Phys. Rev. Lett. 84, 4745 (2000)10.1103/PhysRevLett.84.4745]. An explicit scaling relation between the currents and the corresponding conductances is derived, proving the potential flow nature of the latter. Varying a unique parameter, the topology of the optimized networks shows a transition from a tree topology to a very redundant structure with loops; the transition corresponds to a discontinuity in the slope of the power dissipation.     

Optical excitation of adsorbed nitrogen and its reactions with adsorbed hydrogen

Nitrogen is adsorbed on iron films under uhv conditions and irradiated with wavelengths between 1200 Å and 2400 Å. A “reactive absorption spectrum” is obtained by measuring the change in surface potential after irradiation by means of an electron-beam scanning technique in the retarding field region. Co-adsorption of nitrogen and hydrogen on iron shows a remarkably different spectrum which is interpreted as the result of producing positively charged activated surface complexes with a considerable lifetime.