Dynamics of Bacteriorhodopsin in the Dark-Adapted State from Solution Nuclear Magnetic Resonance Spectroscopy

To achieve efficient proton pumping in the light-driven proton pump bacteriorhodopsin (bR), the protein must be tightly coupled to the retinal to rapidly convert retinal isomerization into protein structural rearrangements. Methyl group dynamics of bR embedded in lipid nanodiscs were determined in the dark-adapted state, and were found to be mostly well ordered at the cytosolic side. Methyl groups in the M145A mutant of bR, which displays only 10 % residual proton pumping activity, are less well ordered, suggesting a link between side-chain dynamics on the cytosolic side of the bR cavity and proton pumping activity. In addition, slow conformational exchange, attributed to low frequency motions of aromatic rings, was indirectly observed for residues on the extracellular side of the bR cavity. This may be related to reorganization of the water network. These observations provide a detailed picture of previously undescribed equilibrium dynamics on different time scales for ground-state bR.     

The spin-isospin decomposition of the nuclear symmetry energy from low to high density

The energy per particle BA in nuclear matter is calculated up to high baryon density in the whole isospin asymmetry range from symmetric matter to pure neutron matter.The results,obtained in the framework of the Brueckner-Hartree-Fock approximation with two-and three-body forces,confirm the well-known parabolic dependence on the asymmetry parameterβ=(N?Z)/A(β^2 law)that is valid in a wide density range.To investigate the extent to which this behavior can be traced back to the properties of the underlying interaction,aside from the mean field approximation,the spin-isospin decomposition of BA is performed.Theoretical indications suggest that theβ^2 law could be violated at higher densities as a consequence of the three-body forces.This raises the problem that the symmetry energy,calculated according to theβ^2 law as a difference between BA in pure neutron matter and symmetric nuclear matter,cannot be applied to neutron stars.One should return to the proper definition of the nuclear symmetry energy as a response of the nuclear system to small isospin imbalance from the Z=N nuclei and pure neutron matter.     

Enantiodiscrimination of racemic electrophiles by diketopiperazine enolates: asymmetric synthesis of methyl 2-amino-3-aryl-butanoates and 3-methyl-aspartates

Enolates of (S)-N,N′-bis-(p-methoxybenzyl)-3-iso-propylpiperazine-2,5-dione exhibit high levels of enantiodiscrimination in alkylations with (RS)-1-aryl-1-bromoethanes and (RS)-2-bromoesters, affording substituted diketopiperazines containing two new stereogenic centres in high de. Deprotection and hydrolysis of the resultant substituted diketopiperazines provides a route to the asymmetric synthesis of homochiral methyl 2-amino-3-aryl-butanoates and 3-methyl-aspartates in high de and ee.     

An algebra of meromorphic corner symbols

Operators on manifolds with corners that have base configurations with geometric singularities can be analysed in the frame of a conormal symbolic structure which is in spirit similar to the one for conical singularities of Kondrat'ev's work. Solvability of elliptic equations and asymptotics of solutions are determined by meromorphic conormal symbols. We study the case when the base has edge singularities which is a natural assumption in a number of applications. There are new phenomena, caused by a specific kind of higher degeneracy of the underlying symbols. We introduce an algebra of meromorphic edge operators that depend on complex parameters and investigate meromorphic inverses in the parameter-dependent elliptic case. Among the examples are resolvents of elliptic differential operators on manifolds with edges.