A new approach to binary tree-based heuristics

The goals and limitations of some clustering methods are briefly reviewed. In order to avoid the usual methods which are very demanding on computer time and space, a new scheme is proposed for updating (generation) of, and retrieval from, large data bases organized as binary trees. The method is based on calculation of three distances at any given vertex l on the level n, A(l,n) instead of two. The respective distances d₁(X,A_l), d₂(X,A_r), d₃(A_lA_r) are calculated between the input vector X and the left and right descendant of the vertex A(l,n), A_l and A_r, respectively. The advantage of the method compared to the standard clustering methods or formation of hierarchal trees is that the required memory or computational time is reduced from N² to approximately N log N (N is the number of clustering objects).     

Determination of heavy metal concentrations in plants exposed to different degrees of pollution using ICP-AES

Plant samples (Plantago lanceolata - narrow leaf plantain and Cichorium endiviae - endive) were collected in the surroundings of heavy metal emission sources and in other less contaminated areas. After digestion in a closed microwave system using HNO(3), the concentrations of Cd, Co, Cr, Cu, Fe, Mn, Mo, Ni, Pb, and Zn were determined using ICP-AES. Detection limits for all the elements of interest are given. Differences in heavy metal uptake rate between both plant species were observed. The uptake is more intensive for endive than for narrow leaf plantain. High concentrations of some heavy metals were determined in the unwashed plant samples as a result of exposure to aerosols. Tukey's statistical test was used to confirm the discrepancy of Cr concentration in plant samples from various areas. Washing the leaves with water was found to remove a large amount of water-soluble aerosols.     

Computer generation of chemical structures from known fragments

The interactive generation of chemical structures from given fragments is described and discussed. It is implemented as a part of our expert system CARBON, based on C-13 NMR spectra. As it is designed, this program can also be a useful tool in the structure elucidation process when information on parts of the structure is obtained by other means (IR, mass and other spectrometries, chemical analysis, other relevant information). The topological characteristics of candidate fragments are first chosen interactively and then the elements are connected in all topologically possible ways. In the following step, the topological building blocks are substituted by chemical structural fragments resulting in a set of all chemical structures consistent with the input information.     

Computer simulation of ion chromatography separation: an algorithm enabling continuous monitoring of anion distribution on an ion-exchange chromatography column

A computer algorithm for the calculation of ion chromatography separation is presented. It is based on the calculation of equilibrium concentrations of present analyte in discrete column segments. The continuous column is treated as a number of discrete cells or segments where the equilibration process between the stationary phase and the eluent is simulated. The ion-exchange equilibration process is supposed to be instantaneous and quantitative. The continuous flow of the eluent is rendered by discrete transfers. The size of each transfer of the eluent corresponds to a portion of the volume contained in one column segment. The equilibrium calculations in all column segments are repeated for each transfer of the eluent, through all the stages of the chromatographic process. The distribution of the analytes between the stationary phase and the eluent can be monitored at any step and in any column segment which means that the described algorithm provides the spatial and time concentration profiles. The simulated chromatogram is acquired as a time-concentration profile in the last column segment. The obtained chromatograms are in good agreement with the experimental ones. The distribution of ions between the stationary phase and the eluent in the early stages of the ion chromatographic process can thus be studied with confidence.     

Bromination of 2,1,3-benzothiadiazoles

The bromination of 2,1,3-benzothiadiazoles in 47% hydrobromic acid at elevated temperature has led to a general preparative method for the synthesis in high yield of otherwise difficulty accessible brominated 2,1,3-benzothiadiazoles. The typical addition reaction is apparently eliminated under these reaction conditions and substitution takes place exclusively. Bromination of 2,1,3-benzothiadiazole occurs successively at positions 4 and 7. 4-Substituted 2,1,3-benzothia-diazoles are selectively brominated at position 7. 5-Bromo- and 5-methyl-2,1,3-benzothiadiazole are brominated consecutively at positions 4 and 7.     

On 3-D graphical representation of proteomics maps and their numerical characterization

We consider numerical characterization of proteomics maps by representing a map as a three-dimensional graphical object based on x, y coordinates of the spots and using their relative abundance as the z coordinate. In our representation the protein spots are first ordered based on their relative abundance and labeled accordingly. In the next step a 3-D path is constructed connecting spots having adjacent labels. Finally a matrix is constructed by assigning to each pairs of labels (i, j) matrix element, the numerical value of which is based on the quotients of the Euclidean distance and the distance along the 3-D zigzag between the two points. The approach has been illustrated on a fragment of a proteomics map and compared with 2-D graphical representation of proteomics maps.     

Neue Synthesen von 4,4′-Äthinylendiphenol (4,4′-Dihydroxytolan)

Zusammenfassung Es werden zwei neue Wege zur herstellung des 4,4-Äthinylendiphenols beschrieben. Der erste beruht auf der Entmethylierung des Bis-(4-methoxyphenyl)acetylens, der zweite auf der Oxydation des 4,4-Dihydroxybenzildihydrazons nach derCurtiusschen Methode.

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Two new syntheses of 4.4-ethynylene diphenol

Two new syntheses of 4.4-ethynylene diphenol are described: demethylation of bis-(4-methoxyphenyl)-acetylene, and oxidation of 4.4-dihydroxybenzildihydrazone according toCurtius.

     

Chemical data,ways and means,past and future

A brief outline of various data handling methods, from linear learning machines, principal component analysis, experimental design, and modeling to visualization, optimization, and validation together with a personal view on the historical development of the use of these methods, is given. Some future trends in handling chemical data are proposed as well. Copyright © 2014 John Wiley & Sons, Ltd.