An approach to estimate the energy and strength of the intramolecular hydrogen bond in different conformers of 4‐methylamino‐3‐penten‐2‐one

The molecular structure and intramolecular hydrogen bond energy of 32 conformers of 4‐methylamino‐3‐penten‐2‐one were investigated at MP2 and B3LYP levels of theory using the standard 6–31G** basis set and AIM analyses. Furthermore, calculations for all the possible conformations of 4‐methylamino‐3‐penten‐2‐one in water solution were also carried out at B3LYP/6–31G** level of theory. The calculated geometrical parameters and conformational analyses in gas phase and water solution show that the ketoamine conformers of this compound are more stable than the other conformers (i.e., enolimine and ketoimine). This stability is mainly due to the formation of a strong N? H···O intramolecular hydrogen bond, which is assisted by π‐electrons resonance. Hydrogen bond energies for all conformers of 4‐methylamino‐3‐penten‐2‐one were obtained from the related rotamers method. The nature of intramolecular hydrogen bond existing within 4‐methylamino‐3‐penten‐2‐one has been investigated by means of the Bader theory of atoms in molecules, which is based on topological properties of the electron density. The results of these calculations support the results which obtained by related rotamers method. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

Density functional theory study of the Fourier transform infrared and Raman spectra of Cu(II) bis-acetylacetone

Fourier transform infrared and Fourier transform Raman spectra of Cu(II) bis-acetylacetone have been obtained. The geometry, frequency and intensity of the vibrational bands of this compound and its 1,5-(13)C(2), 3-(13)C, 1,3,5-(13)C(3), 2,4-(13)C(2), (18)O(2) and 2,4-(13)C(2)-(18)O(2) derivatives were obtained by the density functional theory (DFT) with the B3LYP functional and using the 6-31G(*) and 3-21G(*) basis sets. The calculated frequencies are compared with the solid infrared and Raman spectra. All the measured infrared and Raman bands were interpreted in terms of the calculated vibrational modes. The percentage of deviation of the bond lengths and bond angles gives a good picture of the normal modes, and serves as a basis for the assignment of the wavenumbers. Most computed bands are predicted to be at higher wavenumbers than the experimental bands. The calculated geometrical parameters show slight differences compared with the experimental results. These differences can be explained by the different physical state of Cu(II) bis-acetylacetone. The DFT-B3LYP calculations assumed a free molecule in the gas phase. Analysis of the vibrational spectra indicates a strong coupling between the chelated ring modes.     

The analysis of structural and electronic properties for assessment of intramolecular hydrogen bond (IMHB) interaction: a comprehensive study into the effect of substitution on intramolecular hydrogen bond of 4-nitropyridine-3-thiol in ground and electronic excited state

The hydrogen bond strength, molecular geometry, π-electron delocalization, and physical properties such as dipole moment, chemical potential, and chemical hardness of 4-nitropyridine-3-thiol and its 29 derivatives have been studied by means of density functional method with 6-311++G** basis set in gas phase and water solution. Also, the excited-state properties of intramolecular hydrogen bonding in these systems have been investigated theoretically using the time-dependent density functional theory method. The HOMA, NICS, PDI, ATI, FLU, and FLU_π indices as well-established aromaticity indicators have been examined. Natural bond orbital analysis is also performed for better understanding the nature of intramolecular interactions. The electron density and Laplacian (?² ρ) properties, estimated by AIM calculations, indicate that H···O bond possesses low ρ and positive ?² ρ values, which are in agreement with electrostatic character of the HBs, whereas S–H bond has covalent character. Numerous correlations between topological, geometrical, and energetic parameters are also found.     

DFT computational study towards investigating Cladribine anticancer drug adsorption on the graphene and functionalized graphene

Structural Chemistry - Density functional theory calculations at the M06-2X/6-31G** level have been carried out to examine the adsorption behavior of Cladribine drug on the graphene and graphene...     

Effect of sulphate groups on catalytic properties of chromium supported by zirconia in the <Emphasis Type="Italic">n</Emphasis>-hexane aromatization

Catalysts based on chromium supported by sulphated and unsulphated zirconia have been synthesised, in one step, by sol–gel method and dried in hypercritical solvent conditions. Comparative study of their catalytic properties shows that dispersed Cr³⁺ seems to be the active species in the n-hexane aromatisation reaction. However, the acidity generated by sulphate groups acts as coke eliminator of the layers deposed on the surface mainly when catalyst is calcined at high temperature.     

Investigation of the solvent effect,molecular structure,electronic properties and adsorption mechanism of Tegafur anticancer drug on Graphene nanosheet surface as drug delivery system by molecular dynamics simulation and density functional approach

To understanding the adsorption mechanism and the induced effects of an anticancer drug, Tegafur molecule, on the surface of Graphene nanosheet (GNS) as a drug delivery system, we have performed density functional theory (DFT) and molecular dynamics (MD) methods. DFT calculations give valuable information on the structure, orientation, adsorption energy and charge transfer of nanosheet-molecule in the equilibrium GNS-Tegafur complexes in the gas phase as well as in the aqueous phase, i.e., water. The optimization of GNS-Tegafur geometries shows that drug molecule tends to adsorb via its six-membered aromatic ring to the hexagonal ring of Graphene nanosheet by π–π stacking interaction at the most stable physisorption configuration. Furthermore, the calculated solvation energy (E_sol) represented by a polarizable continuum model show the significant increase in the solubility of GNS after drug adsorption on its surface in the presence of H₂O solvent which leading to the possible applications of GNS in the drug delivery systems. MD simulation is also used to determine the effect of drug concentrations on dynamic properties of Tegafur adsorption on the GNS surfaces in the solution phase. Based on the obtained MD results, it is found that by increasing drug concentration, the van der Waals (vdW) interaction energy becomes more negative and the stabilities of the simulated complexes increase.     

Reinvestigation of intramolecular hydrogen bond in malonaldehyde derivatives: An ab initio,AIM and NBO study

The RAHB systems in malonaldehyde and its derivatives at MP2/ 6‐311++G(d,p) level of theory were studied and their intramolecular hydrogen bond energies by using the related rotamers method was obtained. The topological properties of electron density distribution in O? H···O intramolecular hydrogen bond have been analyzed in term of quantum theory of atoms in molecules (QTAIM). Correlations between the H‐bond strength and topological parameters are probed. The results of QTAIM clearly showed that the linear correlation between the electron density distribution at HB critical point and RAHB ring critical point with the corresponding hydrogen bond energies was obtained. Moreover, it was found a linear correlation between the electronic potential energy density, V(r_cp), and hydrogen bond energy which can be used as a simple equation for evaluation of HB energy in complex RAHB systems. Finally, the similar linear treatment between the geometrical parameters, such as O···O or O? H distance, and Lp(O)→σ*_OH charge transfer energy with the intramolecular hydrogen bond energy is observed. © 2010 Wiley Periodicals, Inc., Int J Quantum Chem, 2011     

N?H···S and S?H···N intramolecular hydrogen bond in β‐thioaminoacrolein: A quantum chemical study

The conformational study of β‐thioaminoacrolein was performed at various theoretical levels, HF, B3LYP, and MP2 with 6‐311++G(d,p) basis set, and the equilibrium conformations were determined. To have more reliable energies, the total energies of all conformers were recomputed at high‐level ab initio methods, G2MP2, G3, and CBS‐QB3. According to these calculations, the intramolecular hydrogen bond is accepted as the origin of conformational preference in thialamine (TAA) and thiolimine groups. The hydrogen bond strength in various resonance‐assisted hydrogen bond systems was evaluated by HB energy, geometrical parameters, topological parameters, and charge transfers corresponding to orbital interactions. Furthermore, our results reveal that the TAA tautomer has extra stability with respect to the other tautomers. The population analyses of the possible conformations by NBO predict that the origin of this preference is mainly due to the π‐electron delocalization in framework of TAA forms, especially usual π_C?C → π*_C?S and Lp (N) → π*_C?C charge transfers. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

Effect of Al<Subscript>2</Subscript>O<Subscript>3</Subscript> phases on the enhancement of thermal conductivity and viscosity of nanofluids in engine oil

Thermal conductivity of α-Al₂O₃ was measured using hot wire method. α-Al₂O₃ (20 nm in size) was synthesized by microwave method for which, the results were compared with commercially available γ-Al₂O₃. Thermal conductivity of nanofluids was investigated considering, it is dependency on Al₂O₃ phase. It was observed that by adding 3 wt% of nano γ-Al₂O₃ and α-Al₂O₃ to the engine oil, thermal conductivity increases by 37 and 31%, respectively. The corresponding viscosity increase for the same amount of nano γ-Al₂O₃ and α-Al₂O₃ were 36 and 38%, respectively. It was concluded that the differences in thermal conductivity originate from higher specific surface area of γ-Al₂O₃ compared to the α-Al₂O₃ which is the result of porosity difference, obtained during the synthesis process.