Nature of 2-Aminoxanthone Fluorescence

Absorption and fluorescence spectra of 2-aminoxanthone in solutions of different types at 77–350 K were studied. The existence of three bands (_{1 max} = 417 nm, ₁ = 14 ns; _{2 max} = 528 nm, ₂ = 13 ns; and _{3 max} = 565 nm, ₃ = 6 ns) in fluorescence of 2-aminoxanthone solutions has been established. It was shown that the first short-wave band was determined by deactivation of singlet excitation of an aminoxanthone molecule. The band with _{3 max} = 565 nm (depending on the concentration) is connected with excimer-type aggregates, which are formed by aminoxanthone molecules grouped with the help of dipole molecules of solvent or by weak hydrogen bonds between aminoxanthone molecules. The emission in band _{2 max} = 528 nm is caused by reversible changes in the 2-aminoxanthone molecule and probably is connected with an intramolecular proton transfer.     

Effect of absorption of low-molecular-weight compounds by some polymer flocculants

The sorption properties of the intramolecular complex - poly(acrylamide) to poly(vinyl alcohol) grafted copolymer (PVA-PAA_N) in block state were investigated with respect to a number of compounds. The relatively small molecules of phenol, phenylalanine in water solution as well as nitrobenzene in hexane are strongly absorbed by PVA-PAA_N films. The large humine acid molecules (sizes are larger by more than ≈ 10 times) are absorbed by PVA-PAA_N very weakly. It was determined the absorption influence on the character of polymer film solution. In a number of cases the oscillation of the dilution and sorption were observed when determining the critical concentrations of guest molecules in the upper layer of polymer films were achieved. The possible mechanisms of absorption were discussed.     

Interactions of cyanine dyes with nucleic acids. XXIV. Aggregation of monomethine cyanine dyes in presence of DNA and its manifestation in absorption and fluorescence spectra.

Absorption, fluorescence emission and excitation spectra of benzothiazole cyanine dyes--thiazole orange (TO) and 7-methyl-6-(3-methyl-2,3-dihydro-1,3-benzothiazol-2-ylidenmethyl) [1,3] dioxolo [4',5':4,5] benzo [d] [1,3] thiazolium methylmethosulfate (Cyan 13)--were investigated over a wide concentration range. The dyes form aggregates with a 'sandwich'-like structure in water solution. At low dye to DNA concentrations ratios, Cyan 13 and TO monomers appear to interact with the DNA. On increasing the dye to DNA concentrations ratio, free dye molecules aggregate with the DNA-bound ones. The spectra of the free dye aggregates and the aggregates formed on the DNA, are characterized by an anomalously large (more than 100 nm) Stokes shift. This suggests, that the pi-electron systems of the aggregates undergo substantial changes in excited state, compared to those of the monomers. The formation of aggregates consisting of the free and DNA-bound dye molecules can be explained using the half-intercalation model of the interaction of the cyanine dye monomers with the DNA.     

Interaction of cyanine dyes with nucleic acids. XVII. Towards an aggregation of cyanine dyes in solutions as a factor facilitating nucleic acid detection

Spectral properties of newly synthesized cyanine dyes, namely 1-[6-(4-[6-[2,6-dimethyl-4-(3-methyl-2,3-dihydro-1,3-benzothiazol- 2-ylidenmethyl)-1-pyridiniumyl]hexanoyl]piperazino)-6- oxohexyl]-2,6-dimethyl-4-(3-ethyl-2,3-dihydro-1,3-benzothiazol+ ++-2-ylidenmethyl)pyridinium (K-6) (bichromophoric dye) and 1-[5-di(3-[5-[2,6-dimethyl-4-(3-methyl-2,3-dihydro-1,3-benzothiazol++ +-2-ylidenmethyl)-1-pyridiniumyl]pentylcarboxamido]pro pyl) carbamoylpentyl]-2,6-dimethyl-4-(3-methyl-2,3-dihydro-1,3-benzo thiazol-2-ylidenmethyl) pyridinium (K-T) (trichromophoric dye) in solutions in the presence of and without deoxyribonucleic acid (DNA) were studied within a wide concentration range. It has been established that absorption, as well as fluorescence of investigated dye solutions, without DNA are mainly determined by H-aggregates of dye molecules. On the contrary, the fluorescence of dye solutions in the presence of DNA gives an intrinsic dye molecular fluorescence. H-aggregates are broken because of binding dye molecules with DNA. It has been suggested that both K-T and K-6 molecules bind mainly with DNA via the interaction of two chromophores. As the ratio of the number of dye molecules to that of DNA base pairs increases with an increase in dye concentration, a formation of dye molecule H-aggregates on DNA molecules are observed. Such aggregates have a different structure than those formed in the solutions without DNA. On the grounds of the data obtained, it is concluded that it is possible to use a dye aggregation capable of obtaining higher values for fluorescence enhancement of the DNA stains.