From anisole to 1,2,4,5‐tetramethoxybenzene: Theoretical study of the factors that determine the conformation of methoxy groups on a benzene ring

Unhindered ortho‐dimethoxy‐substituted phenyl rings often display a coplanar conformation. A theoretical study of a series of methoxybenzenes consisting of methoxybenzene (anisole), the three dimethoxybenzenes, and 1,2,4,5‐tetramethoxybenzene, at the DFT/B3LYP/6‐311++G** level of theory, allows us to identify the factors influencing the conformational preference and attribute the coplanarity of such methoxy groups to mesomeric effects. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

Ein Beitrag zur Bestimmung der niederen Fetts?uren nach der Halbdestillationsmethode

Zusammenfassung Die Verschiebung der Halbdestillationswerte derverdünnten Lösungen der niederen Fettsäuren je nach der Konzentration wurde auf Grund der Untersuchungen vonKonowalow und vonWiegner nachgeprüft.Wie aus den Analysenergebnissen hervorgeht, steigt sowohl der Wert von k als auch der Halbdestillationswert bei Ameisensäure und Essigsäure, deren Halbdestillationswert kleiner als 50% ist, in verdünnten Lösungenfortgesetzt mit zunehmender Konzentration der Lösungen. Bei der Propionsäure und der Buttersäure dagegen, bei denen der Halbdestillationswert schon über 50% beträgt,wächst der Wert von k nur bis zu einer bestimmten, verhältnismäig niedrigen Konzentration — bei der Propionsäure 0,2 n und bei der Buttersäure 0,04 n —an, um von da fortan zu sinken.Beim Analysieren von Zweisäurengemischen, in denen das Aufeinanderwirken der Säuren infolge ihrer verschiedenen Dissoziationskonstanten die Verhältnisse kompliziert, sind die erhaltenen Ergebnisse nicht direkt zu verwerten.Diese Arbeit schließt sich an die Erklärung der Methodik an, die bei dem auf Anregung des Herrn Professor Dr.Unto Vartiovaara durchgeführten Untersuchungen über die bakterielle Cellulosezersetzung gegeben wurde.     

Molecular quantum similarity matrix based clustering of molecules using dendrograms

A new scheme for general classification of quantum objects is presented. Based on molecular quantum similarity matrices (MQSM), different algorithms are presented for generating Molecular Quantum Similarity Dendrograms (MQSD). An application of MQSD is presented for a set of steroid molecules.     

Charge Dispersal in the Quinuclidine Radical Cation and in the Quinuclidinium Ion,as Revealed by PE and ICR Spectroscopy

The n ionization energies I and the gas-phase basicities GB of CH₃-, Cl-, or CN-substituted quinuclidines have been measured by PE and ICR spectroscopy. The dependence of the shifts ΔI and ΔGB (relative to the values of the parent molecule) allow conclusions about the charge dispersal accompanying the n ionization or the protonation of quinuclidine in the gas phase. The agreement with the results of a minimal basis set ab initio calculation is excellent. Comparison of the solution pK_a values with either I or GB reveals that 2-substituted quinuclidines exhibit sizeable solvent-induced proximity effects, i.e. that the corresponding quinuclidinium ions are more acidic in solution than expected on the basis of the gas-phase basicities. This agrees with earlier results concerning 2-substituted pyridines.     

Phosphinine-Based Ligands in Gold-Catalyzed Reactions

A series of substituted phosphinines, 1-phosphabarrelenes and 5-phosphasemibullvalenes were synthesized and evaluated for their potential application as ligands in homogeneous catalytic reactions. While their buried volume (%V_bur) was calculated to get insight into the steric properties, [LNi(CO)₃] complexes were prepared in order to determine the corresponding Tolman electronic parameter. ETS-NOCV (extended-transition-state natural orbital for chemical valence) calculations on [LAuCl] complexes further allowed an estimation of the σ- and π-contributions to the L− M interaction. Au^I coordination compounds of selected examples were prepared and characterized by single crystal X-ray diffraction. Finally, the three classes of P^III compounds were successfully used in the Au^I-catalyzed cycloisomerization of N-2-propyn-1-ylbenzamide, showing very good activities and selectivities, which are comparable with the reported data of cationic phosphorus-based gold catalysts.     

Structural change of the heme pocket due to disulfide bridge formation is significantly larger for neuroglobin than for cytoglobin

Human neuroglobin (hNgb) and human cytoglobin (hCygb), two recently discovered members of the vertebrate globin family, are known to be able to form an intramolecular disulfide bridge. Using electron paramagnetic resonance (EPR), we show that formation of a disulfide bridge in ferric hNgb causes a considerable change in the heme pocket structure, whereas this is not so clear for ferric hCygb. The structural results can be related nicely to earlier histidine and dioxygen affinity studies of the ferrous proteins.     

Induced solvent chirality: A VCD study of camphor in CDCl3

It is shown how the presence of a chiral compound in solution induces chirality in the surrounding solvent molecules. Using Vibrational Circular Dichroism on camphor dissolved in deuterated chloroform, it is found that the C–D stretch in the latter indeed becomes VCD active. The experimental results agree with ab initio computed spectra for 1:1 associations between the solvent and solute.     

Conceptual DFT properties‐based 3D QSAR: Analysis of inhibitors of the nicotine metabolizing CYP2A6 enzyme

Structure‐activity relationships of 46 P450 2A6 inhibitors were analyzed using the 3D‐QSAR methodology. The analysis was carried out to confront the use of traditional steric and electrostatic fields with that of a number of fields reflecting conceptual DFT properties: electron density, HOMO, LUMO, and Fukui f⁻ function as 3D fields. The most predictive models were obtained by combining the information of the electron density with the Fukui f⁻ function (r² = 0.82, q² = 0.72), yielding a statistically significant and predictive model. The generated model was able to predict the inhibition potencies of an external test set of five chemicals. The result of the analysis indicates that conceptual DFT‐based molecular fields can be useful as 3D QSAR molecular interaction fields. © 2008 Wiley Periodicals, Inc. J Comput Chem 2009