Local structure analysis of smoky and colorless topaz using single crystal Al NMR

The angular dependence of the ²⁷Al NMR spectrum was measured for single crystals of smoky and colorless topaz, Al₂SiO₄(F,OH)₂. Smoky topaz was obtained by irradiating high energy neutrons to colorless topaz. The quadrupole coupling constant e²Qq/h and the asymmetry parameter η were obtained from the analysis of the angular dependences of quadrupole splitting of the ²⁷Al NMR spectrum. The local structures around the aluminum atoms in smoky and colorless topaz were discussed from the magnitude and the direction of the electric field gradient. The directions of principal axes of the EFG tensor of ²⁷Al were close to the directions of Al-O and Al-F bonds. The difference in the bond lengths between Al(1)-F(1) and Al(1)-F(2) was found to affect the x and y components of the EFG tensor.     

Structural and electronic comparative analysis of aminopyridazines showing anti-GABA activity. Crystal structure of 2-(carboxy-3′-propyl)-3-amino-6-cyclohexylpyridazinium bromide.Ab initio Mulliken population analysis of the 6-phenyl-substituted analog compared to GABA

The crystal structure of 2-(carboxy-3-propyl)-3-amino-6-cyclohexylpyridazinium bromide has been determined by single-crystal X-ray diffraction techniques and refined by full-matrix least squares. The compound crystallized in the tri-clinic space groupP ¯1 witha=10.275(1),b=11.215(1),c=7.082(1) Å,=91.84(1),=102.21(1), =106.77(1)°, andZ=2. FinalR-factor is 0.045. The main structural results are very similar to the ones observed for the 6-phenyl analog. These two compounds are GABA-A antagonists.Ab initio molecular orbital calculations, with STO-3G and 4-31G basis sets, suggest that the exocyclic nitrogen accurately mimics the nitrogen atom of GABA.     

Action de O- et N-nucléophiles sur les sels de phényl-3 benzopyrylium-1

3-Phenyl-1-benzopyrylium percholorates 1a, 1i react exculusively at C-2 with ethanol and isopropyl alcohol, affording mixed acetals 2a, 3a, 3i . Aqueous ammonia gives symmetrical secondary amines 4a, 4b or bis(3-phenyl-2H-1-benzopyran-2-yl)amines, while with aqueous aliphatic amines (40%) bis-acetals 5a, 5b or 2,2′-oxy-bis(3-phenyl-2H-1-benzopyrans) are characterized. In some other acidic conditions, 5a and 5b are also obtained.     

Some theoretical aspects on morphology development in seeded composite latexes. I. Batch conditions below monomer saturation

In seeded emulsion polymerization, during the second stage, new interfaces appear and the surface area changes. A thermodynamic equilibrium approach is presented which predicts particle morphology of a whole range of non-spherical particles upon polymer conversion. Simulation takes into account swelling ratio, molar volumes and interfacial tension. As the particle geometry is complex, a new mathematical procedure is detailed.The computed data are useful to discuss either the stability or the instability of the particles morphology. These results must be compared with actual experimental structures.Abreviations and symbols G Gibbs' free energy - reduced Gibbs' free energy - _i interfacial tension - ₁₂ interfacial tension between polymer 1 and polymer 2 - _1w interfacial tension between polymer 1 and water - _2w interfacial tension between polymer 2 and water - r ₁ polymer 1 swollen by monomer 2 sphere radius - r ₂ polymer 2 swollen by monomer 2 sphere radius - r _i interfacial radius - h ₁ sphere 1 distance to minimal section - h ₂ sphere 2 distance to minimal section - h _i interfacial sphere distance to minimal section - sign ofh _i, positive when the interface sphere is on the side of the sphere 2, negative when the interface sphere is on the side of the sphere 1 - A ₁₂ surface between polymer 1 and polymer 2 - A _1w surface between polymer 1 and water - A _1w ⁰ surface between polymer 1 and water before polymerization - A _2w surface between polymer 2 and water - v ₁ volume of the polymer 1 swollen by monomer 2 - v _i volume of the polymer 1 swollen by monomer 2 before polymerization - v ₂ volume of the polymer 2 swollen by monomer 2 - V _p1 polymer 1 molar volume - V _p2 polymer 2 molar volume - V _m2 monomer 2 molar volume - n _p2 polymer 2 number of mole - n _p1 polymer 1 number of moles - n _m21 monomer 2 number of mole in the swollen polymer 1 - n _m22 monomer 2 number of mole in the swollen polymer 2 - n _m2 monomer 2 total number of mole - n _m2 monomer 2 number of mole before polymerization - TGn ₁ polymer 1 swelling rate - TGn ₂ polymer 2 swelling rate - TGn _i maximum number of mole of monomer 2 in polymeri by mole of polymeri - x polymer 2 conversion rate - K, p, q mathematical variables - D, r, a mathematical variables     

Theoretical evaluation of atomic charges to be integrated into conformational analyses of neutral lipids

Conformational analyses of large molecules as fatty acids and triglycerides are usually amenable by molecular mechanics. A correct evaluation of the electrostatic energy term is thus crucial in determining reliable results. In this contribution, we have considered the most abundant fatty acids in biomembranes, i.e., lauric, stearic, oleic, and elaidic acid, and the corresponding triglycerides, i.e., trilaurin, tristearin, triolein, and trielaidin, and estimated the Mulliken and potential-derived charges both at the semiempirical AM 1 and ab initio HF MO STO -3G level. Atomic charges obtained by the Mulliken population analysis do not take into account the full geometry of the molecule. On the contrary, the change of conformation, due to different chains length or the presence of a trans or cis double bond, greatly influences the repartition of the potential-derived charges. A systematic comparative analysis shows that charges calculated by AM 1 are not suitable because as they do not reproduce potential-derived charges obtained by ab initio. © 1993 John Wiley & Sons, Inc.     

Synthesis of 2′-Deoxy-5-(isothiazol-5-yl)uridine and Its Interaction with the HSV-1 Thymidine Kinase

2′-Deoxy-5-(isothiazol-5-yl)uridine ( 12 ) was synthesized starting from 2′-deoxy-5-iodouridine using a Pd-catalysed cross-coupling reaction with propiolaldehyde diethyl acetal followed by deprotection and ring closure using thiosulfate. 2′-Deoxyuridine 12 has a particular place among the 5-heteroaryl-substituted 2′-deoxyuridines in that it has a high affinity for herpes simplex virus type 1 (HSV-1)-encoded thymidine kinase (TK) without antiviral activity. Biochemical studies revealed that 12 is a substrate for viral TK. We further investigated the interaction of 12 with the HSV-1 thymidine kinase. The conformation of 12 in solution was established by NMR spectroscopy. The most stable conformer 12A has the S-atom of the isothiazole ring placed in the neighbourhood of the C(4)?O group of the pyrimidine moiety. The compound was docked in its most stable conformation in the active site of HSV-1 TK and subjected to energy minimization. This demonstrated that the isothiazole moiety binds in a cavity lined by the side chains of Tyr-132, Arg-163, Ala-167, and Ala-168 and that the C(3) atom of the isothiazole moiety is located in close proximity of the phenolic O-atom of Tyr-132 and the aliphatic part of the Arg-163 side chain.     

X-ray crystal structures of three nonbenzodiazepinic ligands for the benzodiazepine receptor sites: SR95926, CMW1842, and L16317:nab initio MO study of the electronic properties

The crystal structures ofp-methoxyphenyl-3-triazolo [4,3-a] isoquinoline (SR95926),p-methoxyphenyl-3-triazolophtalazine (CMW1842), andp-methoxyphenyl-3-N-dimethoxyethylamino-6-triazolophtalazine (L16317) have been solved by direct methods from single-crystal X-ray diffraction data, and refined by full-matrix least squares. SR95926: monoclinic,P2₁/n,a=20.950(3),b=6.769(1),c=9.465(2) Å,=100.90(1)°. CMW1842: triclinic,P¯1,a=8.784(1),b=9.160(4),c=8.555(1) Å,=99.10(2),=93.90(1), =106.77(1)°. L16317: monoclinic,P2₁/_n,a=20.124(3),b=9.586(1),c=10.788(1) Å,=91.91(1)°. FinalR factors are 0.034, 0.037, and 0.053, respectively. Experimental geometries were used to perform STO-3Gab initio molecular-orbital calculations. A relationship between the electronic pattern within the molecules and the affinity of the benzodiazepine receptor sites is pointed out.     

Calculating Fractional-Parentage Coefficients for Six Body System in Translational Invariant Basis

In this paper we present an independent scheme for constructing fractional parentage coefficients using symmetry group apparatus in translationally invariantmodel space, suitable for the six-particle system composed of three-particle bi-clusters, where the presented subsystems have their own intrinsic clusterization. Simple expressions for corresponding antisymmetrization procedure are presented as well as computational results.

     

BLUE AND GREEN LIGHT EFFECTS,AND THEIR PHOTOREVERSIBILITY,UPON ZOOSPORE PRODUCTION AND THE SYNCHRONIZED CYCLE IN PROTOSIPHON BOTRYOIDES KLEBS*

Abstract —The synchronized asexual cycle in Protosiphon botryoides Klebs is described. A blue light (430 nm) inhibition of zoospore production can be photoreversed by green light (550 nm). Similarly, a green light (550 nm) stimulation of zoospore production can be photoreversed by blue (430 nm) light. 430 nm light also shortens the period of zoospore motility, and 550 nm light lengthens this period.