Development of a novel approach for the production of dried genomic DNA for use as standards for qualitative PCR testing of food-borne pathogens

As part of a multi-centre European project, FOOD-PCR, the feasibility of a novel approach for production of dried bacterial DNA that could be used as certified reference materials (CRM) was assessed. Selected strains of Salmonella typhimurium, Listeria monocytogenes, Escherichia coli O157, Campylobacter jejuni and Yersinia enterocolitica were used to produce genomic DNA (gDNA). These preparations gave support to method development for qualitative polymerase chain reaction (PCR) detection methods for food-borne pathogens. Purified gDNA was transformed into stable and dry gDNA by using polypropylene vials as carrier and applying a vacuum-drying technique. The gDNA preparations were shown to be sufficiently stable under ambient transport conditions without cooling and proved to have long-term stability at 5°C of at least 22 months. The dried DNA was easily reconstituted by addition of distilled water then gentle shaking. These studies have shown that production of stable and dry bacterial gDNA material is feasible and could help satisfy the increasing need for certified reference DNA positive control samples in the field of PCR testing for detection and verification of food-borne microbial pathogens.

     

Thermal analysis study on vaporization of some analgesics. Acetanilide and derivatives

The thermal behaviour of acetanilide (Ac) and two of its analogues, namely the para-ethoxyacetanilide (p-Eto Ac) and the para-bromoacetanilide (p-Br Ac), which are used as analgesics in the pharmaceutical industry was studied with a simultaneous TG/DSC unit. The examined analgesics showed two endothermic DSC peaks due to melting and vaporization. By combining the experimental TG data with the corresponding reference vapour pressure data obtained with the Antoine equation the plot of P versus v was derived. From the slope of this equation the constant k-value was determined for Ac. Then, using the same k-value the vapour pressures of p-Eto Ac and p-Br Ac were determined in the same temperature range. The vaporization enthalpies for all the studied compounds were obtained from different methods and a very good agreement was found. Vaporization follows a zero-order kinetics. The activation energy of vaporization (E_vap) was calculated from the dynamic TG experiments, using the Arrhenius equation.     

TWO WATER-SOLUBLE FLUORESCENCE PROBES FOR CHEMIEXCITATION STUDIES: SODIUM 9,10-DIBROMO- AND 9, 10-DIPHENYLANTHRACENE-2-SULFONATE. SYNTHESIS, PROPERTIES AND APPLICATION TO TRIPLET ACETONE AND TETRAMETHYLDIOXETANE

The syntheses of sodium 9,10-dibromo- and 9,10-diphenylanthracene-2-sulfonate (DBAS and DPAS, respectively) are described and their photophysical properties determined. These two probes were used in aqueous solution studies of the kinetic parameters of tetramethyldioxetane thermolysis, which were found to be the same as in organic solvents. The yields of triplet and singlet acetone generated by the decomposition of this dioxetane in water are also comparable to the literature values in organic medium. The lifetime of triplet acetone in water was determined to be 13 ± 2 u.s by a method based on the measurement of the fluorescence decay of DBAS excited via energy transfer from triplet acetone, by the time-correlated single-photon counting technique. Sorbate ion quenches triplet acetone from tetramethyldioxetane with a rate constant smaller but close to the diffusion-controlled limit.     

QUENCHING OF CHEMICALLY and ENZYMICALLY-GENERATED TRIPLET ACETONE BY TYROSINE and 3,5-DIHALOGENODERIVATIVES

Tyrosine and especially its 3,5-dihalogenoderivatives quench acetone triplets. When the excited acetone is generated free in solution, the Stern-Volmer plots for the quenching by these species, monitored via the sensitized emission of the 9,10-dibromoanthracene-2-sulfonate ion, are linear. When triplet acetone is generated enzymically by the peroxidase-catalyzed aerobic oxidation of isobutyral-dehyde, the Stern-Volmer plots for the quenching of the acetone phosphorescence curve upwards in the case of 3,5-dibromotyrosine and even more markedly with 3,5-diiodotyrosine. Quenching appears likely to occur by triplet-triplet energy transfer and especially in the case of the phenoxide form, also by electron transfer. The curvature denotes a static contribution to quenching favoured by the enzyme.     

Determination of alpidem and its metabolites in human plasma by high-performance liquid chromatography and fluorimetric detection

A high-performance liquid chromatographic method has been developed for the simultaneous determination of alpidem and its metabolites in human plasma. The method involved a single extraction of the parent drug and metabolites into diethyl ether from alkalinized plasma, evaporation of the organic solution and chromatography of the extracts on a C18 column coupled to a fluorimetric detector. An internal standard was used for the quantitative determination of the compounds. The method was selective for alpidem and three of its metabolites and has a limit of detection of less than 1 ng ml-1 for all the compounds. Since the chromatographic run took more than 20 min, the chromatographic process was fully automated and performed overnight.     

Enzymatic syntheses of unsaturated polyesters based on isosorbide and isomannide

The search for materials produced from renewable sources aiming at the substitution of petroleum‐based derivates is an area of intense investigation. In this work, the enzymatic copolymerization of isosorbide or isomannide with diethyl adipate and fractions of different unsaturated diesters (diethyl itaconate, diethyl fumarate, diethyl glutaconate, and diethyl hydromuconate) were examined using CAL‐B as catalyst. The polyesters prepared using one‐step syntheses were characterized by SEC, NMR, and MALDI‐TOF MS. In addition, syntheses with linear diols were carried out in bulk to evaluate the reactivity of cyclic diols in producing unsaturated polyesters using enzymatic catalysis, as well as to evaluate the occurrence of addition side reactions on the double bonds. Isosorbide and isomannide yielded unsaturated polymers with values in the order of 4,000‐16,000 when fumarate or glutaconate esters were added in 5 mol % ratio against adipate. In all cases MALDI‐TOF confirmed the presence of unsaturated units. Although these polyesters have unreacted double bonds they are prone to crosslinking and ready to further functionalization, like anchoring bioactive molecules. © 2013 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2013 , 51, 3881–3891     

Thermal analysis and kinetic study of decomposition processes of some pesticides

The thermal analysis of some pesticides using simultaneous TG-DSC measurements and kinetic calculations by the dynamic TG technique have been carried out.With this technique it was attempted to group compounds with similar structures according to the shape and number of peaks of their thermoanalytical curves and to characterize their features by means of thermodynamic and kinetic quantities.Small variations in the structure of the components of a class make larger variations in the thermodynamic and kinetic values being in close agreement with the observed differences in their biological behaviour.

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Zusammenfassung Mittels simultanen TG-DSC-Messungen und kinetischen Berechnungen bei der DTG-Technik wurde eine thermische Analyse einiger Pestizide durchgeführt.Mit dieser Methode wurde versucht, Verbindungen mit ähnlichen Strukturen anhand der Form und Anzahl von Peaks ihrer thermoanalytischen Kurven zu gruppieren und ihre Eigenschaften mittels thermodynamischen und kinetischen Mengen zu charakterisieren.Geringe Änderungen in der Struktur der Komponenten einer Klasse verursachen größere Veränderungen der thermodynamischen und kinetischen Größen, was in enger Übereinstimmung mit den beobachteten Unterschieden ihrer biologischen Aktivität steht.

     

Isoconversional kinetic study of alachlor and metolachlor vaporization by thermal analysis

The vaporization kinetics of two acetamide pesticides, namely alachlor and metolachlor, was studied by thermogravimetric analysis under nonisothermal conditions (using heating rates between 1.0 and 10 K min^?1). A model‐free isoconversional method of kinetic analysis was proposed, and activation energy dependences on the extent of conversion α for nonisothermal experiments were given. An increase in activation energy is shown for alachlor from 50 to 60 kJ mol^?1, while E values do not significantly vary in the range α > 0.1: 63 kJ mol^?1 for metolachlor while 60 kJ mol^?1 for alachlor. At the end of vaporization (0.9 < α < 1.0), the activation energies are in close agreement with the enthalpies of vaporization calculated from DSC measurements. © 2004 Wiley Periodicals, Inc. Int J Chem Kinet 37: 74–80, 2005     

Chemiluminescence Triggered by Hydrolase Activity in a Horseradish Peroxidase/H2O2-Coupled Assay*

2-Methyl-1-propenyl acetate (MPA) was hydrolyzed by wheat lipase, pancreatic lipase, hydrolases and lipopro-tein lipase from serum in a reaction that produces 2-methyl-1-propenol. The latter was subsequently oxidized by horseradish peroxidase (HRP)/H₂O₂/O₂ yielding triplet acetone that emits visible light. The integrated light emission was proportional to the units of lipase or volume of serum present. When pancreatic lipase was assayed, light emission was observed in the presence of bile salt as surfactant and chlorophyll a as light sensitizer. The potential application of this reaction in determinations of hydrolase/Iipase activities is discussed.