Cyclodextrin-enhanced in situ bioremediation of polyaromatic hydrocarbons-contaminated soils and plant uptake

In situ bioremediation of polycyclic aromatic hydrocarbons (PAH) polluted soils can be improved by the augmentation of degrading microbial populations and by the increase of hydrocarbon bioavailability. β-cyclodextrin (β-CD) significantly accelerate the induction of hydrocarbon biodegradation, but it is not still clear its effectiveness during final, slower stages of degradation. Moreover, it is yet not known if the PAH uptake from plants is influenced by the presence of CD. A field study was carried out by creating two plots (A and B). Diesel fuel was spread on the surface, and on plot B a commercial microbial consortium and β-CD were spread. Soybean was seeded in both plots. Soil samples were withdrawn every 10 cm layers from 0 to 60 cm depth, before fuel spreading, immediately after seeding and after soya harvesting. Chemical and microbial analyses were carried out throughout the process to characterize the soil and to determine residual PAHs. Soybean seeds were analyzed for PAH content. It was observed that β-CD induced a significant increase of PAH degradation rate. The microbial inoculum did not improve the degradation; biodegradation activity was strong in superficial layers, and some PAH leaching was observed, that was reduced by CD. The analysis of PAH in soyabeans revealed that an uptake of hydrocarbons occurred, and that it was more significant in plot B. This suggests that the β-CD-enhanced bioremediation process can further be improved by phytoremediation, that could also allow to simultaneously reach an additional profit from a non-food yield for biofuel production.     

Crystallographic analysis of metal-ion binding to human ubiquitin

The metal-binding ability of human ubiquitin (hUb) towards a selection of biologically relevant metal ions and complexes has been probed. Different techniques have been used to obtain crystals suitable for crystallographic analysis. In the first type of experiments, crystals of hUb have been soaked in solutions containing copper(II) acetate and two metallodrugs, Zeise salt (K[PtCl(3)(η(2)-C(2)H(4))]·H(2)O) and cisplatin (cis-[PtCl(2)(NH(3))(2)]). The Zeise salt is used in a test for hepatitis, whereas cisplatin is one of the most powerful anticancer drugs in clinical use. The Zeise salt readily reacts with hUb crystals to afford an adduct with three platinum residues per protein molecule, Pt(3)-hUb. In contrast, copper(II) acetate and cisplatin were found to be unreactive for contact times up to one hour and to cause degradation of the hUb crystals for longer times. In the second type of experiments, hUb was cocrystallized with a solution of copper(II) or zinc(II) acetate or cisplatin. Zinc(II) acetate gives, at low metal-to-protein molar ratios (8:1), crystals containing one metal ion per three molecules of protein, Zn-hUb(3) (already reported in previous work), whereas at high metal-to-protein ratios (70:1) gives crystals containing three Zn(II) ions per protein molecule, Zn(3)-hUb. In contrast, once again, copper(II) acetate and cisplatin, even at low metal-to-protein ratios, do not give crystalline material. In the soaking experiment, the Zeise anion leads to simultaneous platination of His68, Met1, and Lys6. Present and previous results of cocrystallization experiments performed with Zn(II) and other Group 12 metal ions allow a comprehensive understanding of the metal-ion binding properties of hUb with His68 as the main anchoring site, followed by Met1 and carboxylic groups of Glu16, Glu18, Glu64, Asp21, and Asp32, to be reached. In the case of platinum, Lys6 can also be a binding site. The amount of bound metal ion, with respect to that of the protein, appears to be a relevant parameter influencing crystal packing.     

Platinum(II) complexes bearing 1,1'-bis(diphenylphosphino)ferrocene as building blocks for functionalized redox active porphyrins

Reactions of the cationic complex ions [PtMe(Me2SO)(PP)]+ (PP = dppf (1,1'-bis(diphenylphosphino)ferrocene) and dppe (1,2-bis(diphenylphosphino)ethane)) with 5,10,15,20-tetrakis(4-pyridyl)-21H,23H-porphyrin (TpyP) led to the formation of the symmetrical tetraplatinated porphyrin complexes, [PtMe(PP)]4TpyP.X4 (PP = dppf, X = CF3SO3-, 3, and PP = dppe, X = BF4-, 5) containing the organometallic fragment [PtMe(PP)]. The precursor sulfoxide platinum complexes [PtMe(Me2SO)(dppf)]CF3SO3, 2 and [PtMe(Me2SO)(dppe)]BF4, 4, were prepared by halide abstraction from [PtMeCl(dppf)], 1, and by controlled protonolysis of [PtMe2(dppe)] respectively, in the presence of a small amount of dimethyl sulfoxide. All these starting platinum(II) compounds, as well as the porphyrin derivatives 3 and 5, were fully characterized through elemental analysis, 1H NMR mono- and bidimensional, 31P[1H], 31P-1H HMBC, UV/Vis absorption and photophysical measurements. The X-ray crystal structure of complex 1 has been determined. In order to ascertain the electronic influence of ferrocene, the spectroscopic and redox properties of 3 were compared with those of TPyP and of the analogous 5. Cyclic voltammetry (CV), differential pulse voltammetry (DPV), 1H and 31P NMR data, and UV/Vis data, all suggest a certain degree of communication between the central porphyrin and the peripheral hetero-bimetallic fragments. In contrast, no detectable interaction among these peripheral groups seem to come into play. Unlikely from the porphyrin derivative 5, formation of well defined fluorescent mesoscopic ring structures was easily achieved by simple evaporation from diluted dichloromethane solutions of 3.     

8-hydroxyquinoline monomer, water adducts, and dimer. Environmental influences on structure, spectroscopic properties, and relative stability of cis and trans conformers

The low fluorescence quantum yield of 8-hydroxyquinoline cannot be correctly interpreted without knowing the form that such a compound assumes in different environments. The commonly accepted emission-quenching excited-state proton transfer can follow different reaction paths if 8-hydroxyquinoline is dimeric or monomeric or if it exists in the form of cis and trans conformers; in this light, the knowledge of the compound form in a particular environment is basic. We have performed a spectroscopic and computational investigation aimed at the determination of the form of 8-hydroxyquinoline in different solvents. UV-vis, fluorescence, and IR spectral features have been assigned by ab initio computations based on the density functional theory and time-dependent density functional theory; the density functional theory and MP2 computations have been applied to the determination of the relative stability of the dimeric and monomeric cis and trans forms of 8-hydroxyquinoline in different solvents. Molecular dynamics computations have been used to determine the compound behavior in water solutions. According to our results, 8-hydroxyquinoline shows a clear preference for the cis conformation (as dimer or monomer), but, in water solutions, a small fraction of the trans conformation is also present.     

Cyclometalated Pt(IV) trans-diiodo adducts: experimental and computational studies within an homologous series of compounds

Four cyclometalated Pt(IV) compounds, 1a,b and 2a,b, were successfully obtained by oxidative addition of I(2) to 2-phenylpyridinate (PhPy) and Nile Red (NR) derived Pt(II) complexes with acetylacetonate (acac) or hexafluoroacetylacetonate (hacac) ancillary ligands. Single crystal X-ray diffraction, electrochemical, photophysical and computational studies have been performed in comparison with the analogues Pt(II) compounds, shedding new light on the role of the oxidation state of the metal centre towards both the luminescence properties and the dioxygen quenching.     

Investigations on the electronic effects of the peripheral 4'-group on 5-(4'-substituted)phenylazo-8-hydroxyquinoline ligands: zinc and aluminium complexes

A new series of 5-(4'-substituted)phenylazo-8-hydroxyquinolines (H[L-R]; R = N(CH(3))(2), C(2)H(5), n-C(4)H(9), C(CH(3))(3), H, and F, ) has been prepared and the corresponding Zn[L-R](2) (1a-6a) and Al[L-R](3) (1b-6b) complexes successfully synthesized. These compounds have been studied in order to design new molecular materials with enhanced electron transport properties. The obtained species have been extensively characterized by absorption and emission spectra and by cyclic voltammetric measurements. Experimental and computational results show that the Zn[L-N(CH(3))(2)].2H(2)O (1a) and Al[L-N(CH(3))(2)](1b) complexes only feature luminescence (at 620 and 600 nm), respectively. The unique effects, which are induced by the N=N-C(6)H(4)-N(CH(3))(2) group, are further proved by a reversible electron transfer process detected by cyclic voltammetry. These outcomes, discussed on the basis of theoretical calculations performed on the (H[L-N(CH3)2])-, H[L-N(CH3)2] and (H[L-N(CH3)(2)])+ species, suggest that metal complexes formed by 5-(4'-N,N-dimethylamino)phenylazo-8-hydroxyquinoline should be considered as electron transport materials suitable for applications in photonic devices.     

An Interplay Between Infrared Multiphoton Dissociation Fourier-Transform Ion Cyclotron Resonance Mass Spectrometry and Density Functional Theory Computations in the Characterization of a Tripodal Quinolin-8-Olate Gd(III) Complex

A new hexadentate, tripodal 8-hydroxyquinoline based ligand (QH₃) and its gadolinium(III) tris-chelated (GdQ) complex with hemicage structure was investigated by using high resolution Fourier-transform ion cyclotron resonance mass spectrometry (FTICRMS). The protonated adduct of the free ligand and its hemicage tripodal Gd(III) complex, [GdQ + H]⁺, were first observed in experiments of electrospray ionization (ESI) with a linear ion trap (LTQ) mass spectrometer and further investigated by using high resolution FTICRMS. Gas-phase dissociation of the protonated Gd(III) complex, by infrared multiphoton dissociation (IRMPD) FTICR MS, demonstrated a fragmentation pattern with six main product cluster ions labeled as [F_n]⁺ (n?=?1 up to 6). These product ions suggest the elimination of 7-amino-alkyl or 7-alkyl chains of the hemicage moiety. High resolution MS conditions allowed the elucidation of the fragmentation pattern and product ion structures along with the determination, among the isotopic pattern of Gd, of the chemical compositions of closely related species, which differ in terms of hydrogen content. Among the Gd six naturally stable isotopes, ¹⁵⁸Gd is the most abundant, and its peak within each cluster was used as a reference for distinguishing each product ions. Computational DFT investigations were applied to give support to some hypothesis of fragmentation pathways, which could not have been easily justified on the basis of the experimental work. Furthermore, computational studies suggested the coordination geometry of the protonated parent complex and the five- and four-coordinated complexes, which derive from its fragmentation. Furthermore, experimental and computational evidences were collected about the octet spin state of the parent compound.      

Study of titania nanorod films deposited by matrix-assisted pulsed laser evaporation as a function of laser fluence

The effects of annealing at 300 °C on gold nanostructures sputtered onto glass substrate were studied using XRD, SAXSees, the Van der Pauw method and ellipsometry. As-sputtered and annealed samples exhibit a different dependence of the gold lattice parameter on the sputtering time. With increasing sputtering time the average thickness of the layer and the size of gold crystallites increased. Another rapid enlargement of the crystallites is observed after annealing. The volume resistivity decreases rapidly with the increasing sputtering time for both, as-deposited and annealed structures. With increasing sputtering time initially discontinuous gold coverage changes gradually in a continuous one. Electrically continuous gold coverage on the as-sputtered and annealed samples exhibits the same concentration of free charge carriers and Hall mobility. Optical constants of as-deposited and annealed gold films determined by ellipsometry support resistivity measurements and clearly manifest the presence of plasmons in discontinuous films.     

Two-electron reduction of alkyl(sulfanyl)porphyrazines: a route to free-base and peripherally metallated asymmetric porphyrazines

Treatment of octakis(octylthio)porphyrazine (H(2)OOSPz) with cis-bis(benzonitrile)dichloroplatinum(II) in a 1,2,4-trichlorobenzene (TCB)-n-BuOH mixture at 190 degree C affords the asymmetric porphyrazine 2H-heptakis(octylthio)porphyrazine, H(2)HOSPz, in ca. 40% yield. In the key synthetic step the two-electron reduced diprotonated porphyrazine, [H(2)OOPz(4-)(H(+))(2)](hemiporphyrazinogen), forms in nearly quantitative yield. This species undergoes nucleophilic substitution of an octylsulfide group by H(-), affording the asymmetric porphyrazine, this process being favoured by the high-temperature induced charge and structural intramolecular rearrangements. The resulting molecule shows mesomorphic behaviour. Interestingly, in the presence of sodium acetate, or in neat TCB, the asymmetric porphyrazine does not form at all. Under these conditions, a PtCl(2) molecular fragment coordinates both to a porphyrazine aza bridge and to a thioether moiety leading to the formation of the [H(2)OOSPz]PtCl(2) complex. The S,N-coordination of the PtCl(2) unit was proved by (1)H, (195)Pt[(1)H], and (13)C NMR spectroscopy, and supported by DFT (B3LYP) calculations. The complex conjugates high asymmetry with strong solvatochromism and, therefore, it is potentially interesting for nonlinear optics.