Biochemical and Structural Studies of Conserved Maf Proteins Revealed Nucleotide Pyrophosphatases with a Preference for Modified Nucleotides

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Oxidizing of ferulic acid with the use of polyoxometalates as catalysts

The kinetics of catalytic oxidation for ferulic acid with polyoxometalates used as catalysts was studied. The effect of pH and concentrations of the principal reacting components on the process kinetics was studied. A kinetic scheme of oxidation is proposed, and the values of a number of kinetic parameters of the process are determined.     

On a Class of Ordinary Differential Equations of Various Orders on a Graph

Mathematical Notes -     

A luminescence immunoassay test method for determining benzo[a]pyrene in natural water

A test method is developed for determining benzo[a]pyrene in natural water, based on the use of a polyethylene filter (frit) with adsorbed specific antibodies, placed within a transparent column. In passing a test solution, the analyte is adsorbed on the frit similarly to the process implemented in immunoaffinity preconcentration. The added conjugate of a labeled analyte takes the remained vacant binding sites of antibodies. Luminescent semiconductor nanoparticles (quantum dots) CdSe/ZnS, used as labels, enable visual determination under irradiation with UV light. The limit of detection for benzo[a]pyrene in water is ~0.5 ng/mL.     

Gel-based immunoassay for non-instrumental detection of pyrene in water samples

A new qualitative immunologically based tube test for non-instrumental detection of pyrene (PYR) in water samples was developed. The method combines the pre-concentration of analyte by immunoextraction and its detection by immunoassay using Sepharose 4B-immobilized IgG-fraction of a polyclonal anti-PYR antiserum (immunoaffinity gel) and 1-pyrenebutyric acid-horseradish peroxidase conjugate (PYR-BA-HRP). The immunoaffinity gel was placed in a standard 1-ml SPE column through which a 10-ml aliquot of water sample spiked with 10% acetonitrile was passed. Following, free antibody binding sites were detected by application of PYR-BA-HRP. Four minutes after addition of the chromogenic substrate the results were visually evaluated by occurring or stayed away blue colour development for negative and positive samples, respectively. Total time for assay was about 15 min for six samples. Under optimized conditions a cut-off level for pyrene of 0.04 ng ml(-1) was found. At this defined concentration, a set of spiked samples (n=175) was analyzed and very low rates of false negatives (1.2%) and false positives (4.6%) determined which fulfils the requirement set by Commission Decision 2002/657/EC for a screening method. No interference by other PAH compounds like naphthalene, fluoranthene, phenanthrene, anthracene, and benzo[a]pyrene at a concentration of 20 ng ml(-1), i.e., 500-fold excess compared to the defined cut-off level was observed. Different water types like surface water, tap water, bottled water, and melted snow were analyzed for PYR contamination by the proposed method and results confirmed by HPLC-FLD.     

The shear modulus of the human vocal fold in a transverse direction

The aim of this study was to measure the shear modulus of the vocal fold in a human hemilarynx, such that the data can be related to direction of applied stress and anatomical context. Dynamic spring rate data were collected using a modified linear skin rheometer using human hemilarynges, and converted to estimated shear modulus via application of a simple shear model. The measurement probe was attached to the epithelial layer of the vocal fold cover using suction. A sinusoidal force of 3g was applied to the epithelium, and the resultant displacement logged at a rate of 1kHz. Force measurement accuracy was 20microg and position measurement accuracy was 4microm. The force was applied in a transverse direction at the midmembranous point between the vocal process and the anterior commissure. The shear modulus of the three female vocal folds ranged from 814 to 1232Pa. The shear modulus of the three male vocal folds ranged from 1021 to 1796Pa. These data demonstrate that it is possible to obtain estimates for the shear modulus of the vocal fold while preserving anatomical context. The modulus values reported here are higher than those reported using parallel plate rheometry. This is to be expected as the tissue is attached to surrounding structures, and is under natural tension.     

Effect of nucleophilic agents and organized media on the fluorimetric determination of histamine with o-phthalic aldehyde

The addition of nucleophilic agents, 2-mercaptoethanol, 3-mercaptopropionic acid (3-MPA), and N-acetyl cysteine, to the system histamine-o-phthalic aldehyde (OPA) resulted in the following effects: the exclusion of the acidification step, the 1.5-2-fold increase in the time of attaining the optimum fluorescence, the shift of the pH of fluorophore formation of a less alkaline region by 2 units and the widening of its range by two to three times, and the twofold increase in the fluorophore stability (in time in the case of 3-MPA). The addition of surfactant micelles reduced the time of attaining the optimum fluorescence intensity by two times, but its intensity increased (by a factor of 1.3–1.5) only in the presence of nonionic surfactant block copolymers. The widest plateau range (2 pH units), the highest stability of an analytical signal in time (3 h), and the best reaction sensitivity were obtained after the addition of 2-hydroxypropyl-β-cyclodextrin to the histamine-OPA-3-MPA system. Procedures were proposed for the determination of histamine in fish products and wine using nucleophilic agents and different organized media.     

Non-instrumental immunochemical tests for rapid ochratoxin A detection in red wine

Gel-based and membrane-based flow-through immunoassay formats were investigated for rapid ochratoxin A (OTA) detection in red wine. The flow-through set-up consisted of an antibody containing gel or membrane placed at the bottom of a standard solid-phase extraction column (i.e. the flow-through column), combined with a clean-up column. Different clean-up methods were studied for red wine clarification and purification. The optimal method consisted of passing wine, diluted with an aqueous solution containing 1% polyethylene glycol (PEG 6000) and 5% sodium hydrogencarbonate, through strong anion exchange (SAX) silica. An immunoassay for OTA detection in red wine was optimized and a cut-off level at 2 μg L⁻¹ according to EU legislation was achieved with both formats. A more significant colour difference between blank and spiked samples was observed for the gel-based assay making this superior to the membrane-based assay. The proposed rapid gel-based test was compared with a standard immunoaffinity column - high-performance liquid chromatography - fluorescent detection (IAC-HPLC-FLD) method and a good correlation of the results was obtained for naturally contaminated wine samples.