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1.
陈玉锋 《原子与分子物理学报》2021,38(2):021003-021003-5
马来酸氯苯那敏(chlorpheniramine maleate,CPM),化学名为2-[对-氯-α-(二甲氨基)乙基丁苯基], 又名扑尔敏,分子式C20H23ClN2O4,本文采用密度泛函理论(density functional theory,DFT),在M06-2X/6-311+g(d,p)水平上对扑尔敏分子的两种可能的结构进行了优化,优化结果显示分子基态结构具有C1对称性,分子由50个原子组成,共有144个简正自由度,所有的简正振动模式均具有拉曼活性。计算结果表明,吡啶环和苯环所在平面的二面角是92.1°,丁烯二酸和苯环所在平面的二面角是-174.5°。O40-H41和H41-N25键长分别为0.103nm、0.162nm,O40-H41-N25键角为175.29°,采用多功能波函数Multiwfn软件处理结果表明用于表征氢键强度的CVB指数(CVB指数越负,通常氢键越强。)为-0.2268,结果表明O40-H41-N25原子之间存在氢键,马来酸通过羧基上的氢原子和氯苯那敏吡啶环上的N原子通过氢键作用相结合;通过频率计算,获得了扑尔敏分子的拉曼光谱,并利用势能函数分布(PED)对拉曼光谱进行了指认,对谱图信息比较丰富的200-1800cm-1波段进行了分析归属;此外分析并讨论了扑尔敏分子的前线轨道,扑尔敏分子的最高占据轨道HOMO和最低未占据分子轨道LUMO轨道能量分别为-7.95ev、-1.05ev,能级差为6.90ev。为扑尔敏分子的光谱测定和电子结构分析提供了理论基础。  相似文献   
2.
Despite advances in the field, hemoincompatibility remains a critical issue for hemodialysis (HD) as interactions between various human blood constituents and the polymeric structure of HD membranes results in complications such as activation of immune system cascades. Adding hydrophilic polymer structures to the membranes is one modification approach that can decrease the extent of protein adsorption. This study conducted molecular dynamics (MD) simulations to understand the interactions between three human serum proteins (fibrinogen [FB], human serum albumin, and transferrin) and common HD membranes in untreated and modified forms. Poly(aryl ether sulfone) (PAES) and cellulose triacetate were used as the common dialyzer polymers, and membrane modifications were performed with 2-hydroxymethyl methacrylate (HEMA) and poly (2-methoxyethyl acrylate) (PMEA), using polydopamine-assisted co-deposition. The MD simulations were used as the framework for binding energy simulations, and molecular docking simulations were also performed to conduct molecular-level investigations between the two modifying polymers (HEMA and PMEA) and FB. Each of the three proteins acted differently with the membranes due to their unique nature and surface chemistry. The simulations show PMEA binds less intensively to FB with a higher number of hydrogen bonds, which reflects PMEA's superior performance compared to HEMA. The simulations suggest PAES membranes could be used in modified forms for blood-contact applications as they reflect the lowest binding energy to blood proteins.  相似文献   
3.
In the current research, through employing the dual ligand method, a novel coordination polymer has been produced in success via the reaction between H2glu and In(NO3)3·6H2O in the existence of the nitrogen-donor chelating 2,2′-bpy ligand in CH3CN In(III) and DMF mixed solvent, and its chemical formula is In(glu)(Hglu)(2,2′-bpy) (1, 2,2′-bpy is 2,2′-bipyridine and H2glu is glutaric acid). Its application values on the acute stroke were assessed and the corresponding mechanism was investigated simultaneously. Firstly, the levels of inflammatory response in the astrocytes were evaluated by ELISA by measuring the content of inflammatory cytokines released into cerebrospinal fluid. Additionally, the miRNA199a relative expression levels in astrocytes were measured via exploiting real time RT-PCR. Molecular docking simulation demonstrated that synthesized In ion complex exhibited excellent biological activities, multiple binding interactions were formed by the carboxyl groups on the In ion complex.  相似文献   
4.
沥青分子结构和沥青热转化行为的调控是制备高品质沥青基炭材料的关键。为进一步明晰沥青热解行为与沥青分子结构间的关联性,选用8种有机溶剂对中温沥青(AGMP)在常温下进行超声萃取处理得到8 种萃取物。利用 PeakFit v4.12 软件对各种萃取物的红外光谱吸收峰700~900,1 000~1 800,2 800~3 000和3 000~3 100 cm-1四个区域进行了分峰拟合处理,从而获得了萃取物所含各种官能团的精细结构信息,并引入6种分子结构参数(I1~I6),表征萃取物分子结构与热解活化能的关系。傅里叶变换红外光谱(FTIR)谱图分析表明8种萃取物主要是以含氧、含氮等杂原子的脂肪烃侧链为主的缩合芳香环结构组成的复杂化合物。由于萃取剂结构差异,萃取物中的分子结构参数也略有差异。线性结构萃取剂所得萃取物链烃(I5)含量较高,环结构萃取剂所得萃取物芳环(I6)取代结构较多。利用热重分析法(TGA)在不同升温速率(3,6,10,15 K·min-1)下对8种萃取物的热失重行为进行了研究,在等转化率不考虑反应机理的情况下,依据Flynn-Wall-Ozawa法和Kissingr-Akahira-Sunose 法解析得出8 种萃取物的热解活化能(Ea)。结果表明8种萃取物热解活化能在78~116 kJ·mol-1之间,其值大小与官能团结构及含量密切相关。将红外光谱定量分析获得的萃取物红外结构参数与热解活化能进行关联,通过详细分析探讨不同萃取物结构参数与热解活化能的一元线性回归Ea=f(Ii)的分析结果发现,芳香性指数(I3)和支链化程度(I5)是决定萃取物热解活化能大小的主要指标,热解活化能与各单一指标(Ii)拟合结果的正负相关性,表示这一结构从体系中被热解破坏的难易程度。综合考虑各红外结构参数的共同作用,AGMP萃取物热解活化能与红外光谱结构指标之间的拟合关系模型为Ea=-4 294.53I1+73 812.16I2+207 673.32I3-20 324.20I4-168.56I5+857.86I6。结合红外分析得到的这一结果,揭示了更多关于煤沥青的热解特性和动力学的细节信息,有助于理解煤沥青的热解过程和热转化行为。  相似文献   
5.
BackgroundThe recent pandemic by COVID-19 is a global threat to human health. The disease is caused by SARS-CoV-2 and the infection rate is increased more quickly than MERS and SARS as their rapid adaptation to varied climatic conditions through rapid mutations. It becomes more severe due to the lack of proper therapeutic drugs, insufficient diagnostic tool, scarcity of appropriate drug, life supporting medical facility and mostly lack of awareness. Therefore, preventive measure is one of the important strategies to control. In this context, herbal medicinal plants received a noticeable attention to treat COVID-19 in Indian subcontinent. Here, 44 Indian traditional plants have been discussed with their novel phytochemicals that prevent the novel corona virus. The basic of SARS-CoV-2, their common way of transmission including their effect on immune and nervous system have been discussed. We have analysed their mechanism of action against COVID-19 following in-silico analysis. Their probable mechanism and therapeutic approaches behind the activity of phytochemicals to stimulate immune response as well as inhibition of viral multiplication discussed rationally. Thus, mixtures of active secondary metabolites/phytochemicals are the only choice to prevent the disease in countries where vaccination will take long time due to overcrowded population density.  相似文献   
6.
Reaction of 4,4′,4″-nitrilotribenzoic acid (H3L), a C3-symmetric ligand, with the divalent Co(II) salt Co(NO3)2·6H2O in the present of the N-donor ligand 1,2-di(4-pyridyl)ethylene (DPE) affords a new mixed-ligand coordination polymer with the chemical formula of [Co3(TNB)(DPE)2]·2H2O·DMF (1). In this study, CCK-8 assay was used to determine the effect of novel compound on proliferation of gastric cancer cells. The VEGF signaling pathway in gastric cancer cells was determined through employing real-time PCR after treatment of the above complex. Further, molecular docking simulation confirmed that the biological activity was coming from the carboxyl groups through the hydrogen bonding interactions with the receptor protein, the pyridine group only bonded with the Co ion for the formation of the Co complex.  相似文献   
7.
We extracted one new C-methyl flavonoid, farrerol 7-O-β-d-(6-O-galloyl)glucopyranoside (1), along with 11 known flavonoids, from the Cleistocalyx (C.) conspersipunctatus leaves. Elucidation of these flavonoid structures was accomplished through spectroscopic investigation and electronic circular dichroism (ECD) computation. Compared to corosolic acid (IC50: 15.5 ± 0.9 μM), an established inhibitor, the compound 1 (IC50: 6.9 ± 1.2 μM) was found more active in suppressing α-glucosidase. These findings imply the potential of compound 1 as a valid α-glucosidase inhibitor, which also offer evidence for future animal experiments and clinical trials. Besides, molecular docking was employed to explore the probable mechanism for α-glucosidase–compound 1 interaction. The biosynthetic pathway of these flavonoids in C. conspersipunctatus were proposed.  相似文献   
8.
Bacteria-associated infections have increased in recent years due to treatment resistance developed by these microorganisms. Due to the high antibacterial capacity associated with their nanometric size, nanoparticles, such as zinc oxide (ZnO), have proven to be an alternative for general medical procedures. One of the methodologies to synthesize them is green synthesis, where the most commonly used resources are plant species. Using Dysphania ambrosioides extract at various synthesis temperatures (200, 400, 600, and 800 °C), zinc oxide nanoparticles (ZnO-NPs) with average sizes ranging from 7 to 130 nm, quasi-spherical shapes, and hexagonal prism shapes were synthesized. Larger sizes were obtained by increasing the synthesis temperature. The ZnO crystalline phase was confirmed by X-ray diffraction and transmission electron microscopy. The sizes and shapes were observed by field emission scanning electron microscopy. The Zn-O bond vibration was identified by Fourier transform infrared spectroscopy. Thermogravimetry showed the stability of ZnO-NPs. The antibacterial evaluations, disk diffusion test, and minimum bactericidal concentration, demonstrated the influence of particle size. The smaller the nanoparticle size, the higher the inhibition for all pathogenic strains: Staphylococcus aureus, Staphylococcus epidermidis, Escherichia coli, Pseudomonas aeruginosa, and dental pathogens: Streptococcus mutans, Streptococcus sanguinis, Porphyromonas gingivalis, and Prevotella intermedia. The molecular docking study showed a favorable interaction between ZnO-NPs and some proteins in Gram-positive and Gram-negative bacteria, such as TagF in Staphylococcus epidermidis and AcrAB-TolC in Escherichia coli, which led to proposing them as possible targets of nanoparticles.  相似文献   
9.
Ion-selective water treatment is needed to address emerging problems in an energy- and cost-efficient manner. Capacitive deionization (CDI) is a membraneless water treatment technology, which relies on storing ions in charged electric double layers (EDLs) of micropores. CDI has shown remarkable selectivity, with local density approximations (LDAs) showing some success in guiding selective separations. However, many underlying processes are represented by lumped fitting parameters in LDA models, hindering further progress. Atomistic models help unravel selectivity mechanisms, but are difficult to integrate with cell-level CDI theory. Here, we review and extend LDA models for CDI, highlight a knowledge gap in connecting between LDA and atomistic models for CDI, and emphasize and build upon analogies between micropore EDLs and nanofiltration membranes.  相似文献   
10.
Green synthesis of nanoparticles by eco-friendly methods is a recent technique which draws the attention of researchers because of the reward over many conventional chemical methods. The present work focuses on aqueous Limonia acidissima leaf extract in synthesizing silver nanoparticles and its applications in a simple way. The silver nanoparticles formed were characterized by Infrared, Ultra violet-visible, X-ray diffraction, transmission electron microscopic, and atomic force microscopic techniques. The powder X-ray diffraction studies and transmission electron microscopic images reveal that the silver nanoparticles synthesized were approximately 10–40 nm and have a spherical structure. The nanoparticles were assayed for their antibacterial, antifungal and antioxidant activity. The antimicrobial studies for the silver nanoparticles show a maximum zone of inhibition of 8.8 mm for Bacillus subtilis bacteria and 8.5 mm for Candida albicans fungi at 3 and 1 μg/mL respectively. In-silico ADMET studies reveal that the toxicity, bioactivity, pharmacokinetics and drug-likeness properties of Limonia acidissima leaf extract is good. The molecular docking studies show that the microbial activity is high for Bacillus subtilis and Candida albicans showing the coincidence of the in silico and in vitro studies as expected. The free radical scavenging activity of nanoparticles is 80 for 100 μg/mL. The 50% of inhibition of silver nanoparticles against human breast cancer cell lines is 18 μg/mL. It is evident that silver nanoparticles would be helpful in treating cancer cell lines and have great perspectives in the biomedical sector.  相似文献   
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