光谱法与共焦荧光成像法研究罗丹明B与ct-DNA的相互作用

采用吸收光谱、荧光光谱以及共焦荧光成像技术研究生理条件下罗丹明B(Rhodamine B,RB)与小牛胸腺DNA(ct-DNA)的相互作用以及相互作用模式。光谱研究结果显示,在450~650 nm的吸收光谱范围内,ct-DNA溶液对罗丹明B有减色作用;在560~660 nm荧光发射光谱范围内,ct-DNA对罗丹明B有荧光猝灭作用。同时,随着ct-DNA的加入,罗丹明B溶液的荧光偏振值发生变化,说明罗丹明B与ct-DNA能发生相互作用。在竞争性实验中,罗丹明B未能将亚甲基蓝(MB)从MB-ct-DNA复合体系中置换出来,说明罗丹明B与ct-DNA通过沟槽结合方式发生相互作用。共焦荧光成像结果显示,ct-DNA加入后,罗丹明B的荧光猝灭十分明显。利用罗丹明B和4',6-二脒基-2-苯基吲哚(DAPI)对He La细胞染色后进行共焦荧光成像,结果进一步证实罗丹明B与ct-DNA是通过沟槽结合作用将细胞核染成红色。     

Interaction of diethyl aniline methylphosphonate with DNA: Spectroscopic and isothermal titration calorimetry

In this study the diethyl aniline methylphosphonate (DAM) was synthesized, the interaction of DAM with ct-DNA has been investigated by fluorescence spectra, UV spectra, molecular modeling and isothermal titration calorimetry (ITC). The binding constant of DAM to ct-DNA calculated from both isothermal titration calorimetry and fluorescence spectra were found to be in the 10⁴ M⁻¹ range. According to the ethidium bromide displacement studies, UV spectra and isothermal titration calorimetry experimental results, it can be concluded that DAM is an intercalator that can slide into the G-C rich region of ct-DNA. Furthermore, the results obtained from molecular modeling corroborated the experimental results obtanied from spectroscopic and ITC investigations. At the same time, fluorescence spectra suggested that the mechanism of the interaction of DAM to ct-DNA was a static enhancing type. ITC data showed that ct-DNA/DAM binding is enthalpy controlled.     

Synthesis,characterization and DNA interaction studies of a new platinum(II) complex containing caffeine and histidine ligands using instrumental and computational methods

A new Pt(II) complex, [Pt(Caff)(His)(Cl)] (Caff is Caffeine (3,7-dihydro-1,3,7-trimethyl-1H-purine-2,6-dione) and His is l-Histidine), was synthesized and characterized using different physicochemical methods. The interaction of this complex with calf thymus DNA (ct-DNA) was investigated by absorption, emission, circular dichroism (CD), and viscosity measurements and molecular docking techniques. The calculated binding constant, K_b, was 5.3 × 10³ M^?1. In fluorimetric studies, the enthalpy and entropy of the reaction between the complex and ct-DNA showed that the reaction is exothermic (?H = ?184.07 kJ mol^?1, ?S = ?551.97 J mol^?1 K^?1). CD spectra of DNA in the presence of different amounts of the complex showed little changes in both the negative and positive band intensities, which imply a non-intercalative mode between the DNA and the platinum complex. Furthermore, the study of molecular docking also indicated that the complex binds to DNA via a groove binding mode.     

钌-菲罗啉卟啉的合成及与DNA的相互作用

以5-(4-羟基苯基)-10,15,20-三苯基卟啉和钌-菲罗啉衍生物为原料, 合成了3个两亲性钌-菲罗啉卟啉化合物, 并通过核磁共振波谱、红外光谱、紫外-可见光谱、质谱和元素分析等对化合物的结构进行了确证. 采用紫外-可见光谱、 荧光发射光谱和圆二色光谱考察了目标化合物与ct-DNA的相互作用, 研究了它们与DNA的结合模式. 实验结果表明, Por1, Por2和Por3与DNA的结合常数分别为1.46×10⁵, 2.75×10⁵和5.69×10⁵ L/mol. 此外, 在不同DNA浓度下, Por1和Por2与DNA的结合模式为插入模式和外部结合模式共存, Por3与DNA的结合模式主要为自堆积的外部键合和静电作用. 结果表明, 钌-菲罗啉卟啉化合物是新型的光动力治疗试剂.     

光谱法研究普利沙星与小牛胸腺DNA的结合作用

利用紫外光谱,荧光光谱及流体动力学方法,研究了普利沙星与小牛胸腺DNA的作用机理。讨论了不同浓度普利沙星与DNA作用的紫外光谱,荧光光谱,磷酸盐效应以及离子强度对两者相互作用的影响,测量了DNA的热变性温度和粘度。从紫外光谱图上看出DNA发生了明显的减色效应, 说明普利沙星可能与DNA发生作用。普利沙星的荧光光谱发生了有规律的猝灭,最大发射峰发生红移, 猝灭常数为3.1×104 L·mol-1, 为静态猝灭,表明普利沙星与DNA结合生成了二元复合物。磷酸盐效应表明普利沙星与DNA的磷酸基团不发生静电作用。普利沙星引起了DNA的热变性温度略微升高(≤7℃)和DNA粘度略微下降, 表明普利沙星与DNA之间不存在插入作用, 只是在DNA的外部发生沟槽作用。     

Synthesis,characterization and comparative DNA interaction studies of new copper(II) and nickel(II) complexes containing mesalamine drug using molecular modeling and multispectroscopic methods

Complexes of copper(II) and nickel(II) containing the drug mesalamine (5-ASA) have been synthesized and characterized by FT-IR, mass and UV–vis spectra, elemental analysis, and theoretical methods. The binding interactions between mesalamine and its Cu(II) and Ni(II) complexes with calf thymus DNA (ct-DNA) were investigated using absorption, fluorescence emission and circular dichroism (CD) spectroscopies, and viscosity measurements. Absorption spectra of 5-ASA, Cu(II) and Ni(II) complexes showed hypochromism. The calculated binding constants (K_b) obtained from UV–vis absorption studies were 1.27 × 10³, 1.6 × 10³, and 1.2 × 10⁴ M^?1 for 5-ASA, Cu(II) and Ni(II) complexes, respectively. The compounds induced detectable changes in the CD spectra of ct-DNA (B → A structural transition, B → C structural transition and stabilization of the right-handed B form, for mesalamine, Cu(II) and Ni(II) complexes, respectively). The competitive binding experiments with Hoechst 33258 indicated that 5-ASA and copper complex could interact as groove binders. Furthermore, Ni complex had no effect on the fluorescence intensity and peak position of MB-DNA system. Finally, the results obtained from experimental and molecular modeling showed that complexes bind to DNA via minor-groove binding.     

含N,N-二(2-苯并咪唑甲基)亚胺单核镍(Ⅱ)配合物与DNA相互作用的研究

用荧光光谱法和紫外-可见吸收光谱法研究了含N,N-二(2-苯并咪唑甲基)亚胺单核镍(Ⅱ)配合物与小牛胸腺DNA(ct-DNA)作用的机理。结果表明,随着ct-DNA浓度的增加,配合物表现较强的荧光增强作用,且在不同的温度下荧光增强常数Ks随温度的升高而降低,表明配合物与ct-DNA的作用机理是静态增强过程。根据双对数方程计算出了不同温度下的结合常数K和结合位点数n。稳态荧光猝灭及溴化乙锭(EB)竞争取代实验研究表明配合物与ct-DNA可能以嵌插方式结合。吸收光谱表明配合物增加了DNA双螺旋结构的稳定性。     

O-(硫杂蒽酮-[2]-基)-氧乙酸的合成、表征及与DNA作用的研究

合成了O-(硫杂蒽酮-[2]-基)-氧乙酸,并用元素分析、IR、1H NMR和13C NMR等方法对其结构进行了表征。用光谱学方法研究了该化合物与ct-DNA的相互作用。结果表明,在pH 7.38的模拟体液条件下,该化合物的紫外-可见吸收光谱随ct-DNA浓度的增加,表现出减色效应,使ct-DNA的圆二色谱正负峰的吸收强度有所降低。该化合物的荧光强度被ct-DNA显著猝灭,猝灭常数为1.25×104 L·mol-1,当ct-DNA的浓度在0～12.0 mg·L-1范围内变化时,荧光猝灭值与ct-DNA的浓度呈现良好的线性关系。该化合物对ct-DNA的检出限为1.63 mg·L-1。据此,O-(硫杂蒽酮-[2]-基)-氧乙酸是一种可用于测定ct-DNA浓度的新试剂,与ct-DNA的作用有嵌入和静电吸引两种方式。     

荧光探针技术研究阿特拉津与ct-DNA的相互作用

利用分子荧光探针和紫外吸收光谱技术研究了阿特拉津（Atrazine）与小牛胸腺DNA（ct-DNA）之间的相互作用。实验中选用溴化乙锭（EB）为荧光探针,考察了阿特拉津浓度、磷酸盐、离子强度以及碘化钾对系统荧光的影响。结果表明,阿特拉津对ct-DNA-EB体系的荧光存在猝灭现象,并同时存在静态和动态两种猝灭方式。KI对ct-DNA-Atrazine体系的荧光猝灭及阿特拉津使ct-DNA紫外吸收的增色和红移现象表明阿特拉津与ct-DNA之间存在嵌插作用。磷酸盐、离子强度对ct-DNA-EB-Atrazine体系的荧光强度影响表明,阿特拉津与ct-DNA的磷酸基之间存在非特征性的静电作用,并且高离子强度不利于这种作用。     

2-羟基苯乙酮铜(Ⅱ)配合物与ct-DNA的键合作用研究

以小牛胸腺DNA为靶点,通过紫外可见吸收光谱、稳态荧光发射光谱、圆二色谱和DNA粘度滴定实验,从分子水平研究了2-羟基苯乙酮铜(Ⅱ)配合物[ Cu(HAP)2] (1)与ct-DNA的键合方式.结果表明:配合物[ Cu(HAP)2] (1)主要通过插入作用和静电结合方式与ct-DNA形成键合作用,推测插入作用应基于2-...