4D-proteomics-based breast cancer progressionEI北大核心CSCD

：The occurrence and development of breast cancer go through multiple processes，and the protein molecular information in its evolution is intricate and complex. The 4D-proteomics technique was used to investigate the tumor progression of MMTV-PyMT transgenic mice. The results of protein identification and differential expression analysis showed that a total of 5819 proteins were identified in 4D-proteomics analysis and 5667 proteins were quantifiable. Compared with 3-week-old tumors，a total of 270 differentially expressed proteins were found in the 5-week-old tumors，while 255 proteins in the 7-week-old tumors. We also detected 23 of proteins （such as，Srpk11 and Tinagl1）with gradual up-regulation and 35 of proteins （such as，Pdgfrb， Col1a2 and Col1a1）with gradual down-regulation during the tumor progression，including 3-，5-and 7-weeks. We also performed bioinformatics analysis，including subcellular localization，GO function analysis and pathway enrichment analysis. The results showed that the biological processes（immune regulation and lipid metabolism） and enrichment pathways （metabolic pathway）involved in differentially expressed proteins remained the same during the tumor progression，but some cellular components and molecular functions changed，such as，protein locations were extracellular region and membrane in 5-weeks-old tumors as well as cytoplasm in 7-weeks-old tumors. And important protein functions were protein binding functions in 5-weeks-old tumors as well as nucleotide binding in 7-weeks-old tumors. The acquired protein biomarkers and pathways could help with the accurate exploration of molecular mechanisms of tumor progression，screening of molecular targets of breast cancer，and evaluation of personalized treatment programs. © 2023, Youke Publishing Co.,Ltd. All rights reserved.