Characterization of the monovalent ion position and hydrogen-bond network in guanine quartets by DFT calculations of NMR parameters

Conformational stability of G-quartets found in telomeric DNA quadruplex structures requires the coordination of monovalent ions. Here, an extensive Hartree-Fock and density functional theory analysis of the energetically favored position of Li+, Na+, and K+ ions is presented. The calculations show that at quartet-quartet distances observed in DNA quadruplex structures (3.3 A), the Li+ and Na+ ions favor positions of 0.55 and 0.95 A outside the plane of the G-quartet, respectively. The larger K+ ion prefers a central position between successive G-quartets. The energy barrier separating the minima in the quartet-ion-quartet model are much smaller for the Li+ and Na+ ions compared with the K+ ion; this suggests that K+ ions will not move as freely through the central channel of the DNA quadruplex. Spin-spin coupling constants and isotropic chemical shifts in G-quartets extracted from crystal structures of K+- and Na+-coordinated DNA quadruplexes were calculated with B3LYP/6-311G(d). The results show that the sizes of the trans-hydrogen-bond couplings are influenced primarily by the hydrogen bond geometry and only slightly by the presence of the ion. The calculations show that the R(N2N7) distance of the N2-H2...N7 hydrogen bond is characterized by strong correlations to both the chemical shifts of the donor group atoms and the (h2)J(N2N7) couplings. In contrast, weaker correlations between the (h3)J(N1C6') couplings and single geometric factors related to the N1-H1...O6=C6 hydrogen bond are observed. As such, deriving geometric information on the hydrogen bond through the use of trans-hydrogen-bond couplings and chemical shifts is more complex for the N1-H1...O6=C6 hydrogen bond than for the N2-H2...N7 moiety. The computed trans-hydrogen-bond couplings are shown to correlate with the experimentally determined couplings. However, the experimental values do not show such strong geometric dependencies.     

Ion Association and Hydration in Aqueous Solutions of Nickel(II) and Cobalt(II) Sulfate

Aqueous solutions of nickel(II) and cobalt(II) sulfate have been investigated at 25 ^∘C by dielectric relaxation spectroscopy (DRS) over a wide range of frequencies (0.2 ≤ ν (GHz) ≤ 89) and salt concentrations (0.025 ≤ c(mol-L⁻¹) ≤ 1.4). The spectra indicate, as for MgSO₄(aq) studied previously, the simultaneous presence of double solvent-separated, solvent-shared and contact ion pairs in both NiSO₄(aq) and CoSO₄(aq). The stepwise formation constants for each ion-pair type and the overall association constant, obtained from the data are in good agreement with ultrasonic relaxation and other estimates. The DR spectra at higher concentrations (c ≥ 0.5 mol-L⁻¹) suggest the existence of a nonlinear triple ion M₂SO₄²⁺(aq). Consistent with the very strong hydration of the salts, which have ‘effective’ hydration numbers approaching 27 at infinite dilution, there are no significant differences in any of the relaxation or thermodynamic parameters for NiSO₄(aq) and CoSO₄(aq), except that the triple ion appears to be somewhat more stable for the latter.     

Electron impact induced fragmentation of aromatic N-alkoxy-imines I. Ring closure in (M-CH2O)+• ions by intramolecular aromatic substitution

Summary N-Butoxy- and N-propoxy-imines derived fromo-,m-, andp-substituted benzaldehydes (X = F, Cl, Br, I) decompose upon electron impact to the respective aldoximes by loss of C _n H_2n and competitivelyvia 1,5-distonic radical cations by loss of CH₂O to 1,3-distonic ions which eliminate H and/or a halogen atom in the course of homolytic aromatic substitution, giving rise to cyclic (M-CH₂O-H)⁺ or (M-CH₂O-X )⁺ ions.Dedicated with warm regards to Prof. Dr.D. Seebach, Zürich, on the occasion of his 60^th birthday     

Adsorption of Pd, Ni, and Cu ions on anode-oxidized carbon fiber materials

The anodic oxidation of the carbon felt Carbonetcalon results in the formation of surface defects which serve as centers of strong adsorption of Pd^II, Ni^II, and Cu^II ions. The electrochemical reduction of adsorbed ions makes it possible to obtain metallic catalysts, which undergo multiple redox cycles without loss of metal. The catalysts are characterized by high dispersity of the reduced phase, high adsorption capacity with respect to hydrogen, and 100% selectivity in hydrogenation of acetophenone. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 1, pp. 81–85, January 1997     

Solvent effect on reaction rates: Reaction between sodium ethoxide and methyl iodide in ethanol + cyclohexane solvent systems

The kinetics of the reaction between sodium ethoxide and methyl iodide has been studied at 25°C in various cyclohexane-ethanol solvent mixtures with a cyclohexane content of 10 to 50% per volume. The determination of the rate constants att=0 were carried out by a new iterative method proposed in this investigation. The obtained results show that the reaction rate decreases with the increasing cyclohexane content. This behavior can be attributed to various solute-solvent interactions of electrostatic nature. On the other hand, the variation of ion and ion pairs rate constants with solvent composition permits the various solvation effects to be taken into account.     

双水相萃取法分离铍(Ⅱ)、铁(Ⅲ)与铁(Ⅱ)、铬(Ⅲ)、锰(Ⅱ)、铝(Ⅲ)

研究了在聚乙二醇2000(PEG)-硫酸钠(Na2SO4)-邻苯二酚紫(PV)体系中铍(Ⅱ)、铁(Ⅲ)、铁(Ⅱ)、铝(Ⅲ)、铬(Ⅲ)、锰(Ⅱ)的萃取行为。试验结果表明,铍(Ⅱ)在pH 3.5-7.0及铁(Ⅲ)在pH 4.0-7.0范围内可以被PEG相几乎完全萃取,而铝(Ⅲ)、铬(Ⅲ)在pH 1.0-7.0、锰(Ⅱ)在pH 1.0-4.5、铁(Ⅱ)在pH 1.0-4.5则不被萃取。从而实现了将铍(Ⅱ)(pH 3.5)、铁(Ⅲ)(pH 5.0)与铝(Ⅲ)、铬(Ⅲ)、锰(Ⅱ)、铁(Ⅱ)混合离子的定量分离。同时探讨了PEG相的萃取机理。     

超支化共轭聚合物的合成、性质及在光电器件中的应用研究进展

简述超支化共轭聚合物光电活性材料研究进展,设计、合成了多种具有3-D立体结构的超支化共轭聚合物,研究了它们的结构与性能的关系及其在器件上的应用.实验结果表明,这种聚合物具有良好的溶解性,可成膜性和高的发光效率.可应用于发光二极管(LED),发光电化学池(LEC),光伏打电池等器件.这类化合物不仅可以作为发光材料,还可以通过修饰得到具有分子或离子识别、信息存储性能的特殊功能材料.     

Kinetics of heterogeneous decomposition of hydrogen peroxide

The kinetics of the decomposition of hydrogen peroxide was studied in aqueous medium in the temperature range 25–40°C in the presence of Wofatit KPS-resin in the form of Cu(II)-ammine complex ions. The rate constant was deduced at various degrees of resin cross-linkage and different concentrations of hydrogen peroxide. The order of the decomposition reaction varied from first order to half order, i.e., the order of the reaction decreased with increasing the concentration of H₂O₂. The decomposition process was found to be a catalytic reaction which was controlled by the chemical reaction of H₂O₂ molecules with the active species inside the resin particles. The mechanism of the reaction can be summarized by the equation in which the subsequent reactions of the probable active complex are discussed.     

Kinetics and mechanisms of halide ion catalysis of CO substitution reactions in Os3(CO)12 and Ru3(CO)12 metal carbonyl clusters

The results of kinetic studies on ligand substitution in [M₃(CO)₁₁X]^– complexes (M = Ru, Os; X = Cl, Br, I) are summarized. The [Os₃(CO)₁₁X]^– complexes react with PPh₃ under mild conditions to initially yield monosubstituted products [Os₃(CO)₁₀(PPh₃)X]^–. The rate of CO substitution obeys a first-order equation with respect to the concentration of the complex and does not depend on the ligand concentration. The rates of the reactions decrease in the order Cl > Br > I withH values increasing from 15 to 18 kcal mol^–1 and S values varying from –19 to –13 cal mol^–1 K^–1. The enhanced reactivities of these complexes as well as the low activation energies and negative activation entropies are discussed in terms of the effects of -X bridge formation on the transition state of the reaction. Reactions of PPN[Ru₃(CO)_11–x (Cl)] (PPN is the bis(triphenylphosphine)iminium cation;x=0, 1) and PPN[Ru₃(CO)₉(₃-I)] with alkynes are also reported. The reactivities of alkynes follow the order BuCCH PhCCH EtCCEt PhCCPh. The higher rates of the reactions of monosubstituted acetylenes compared with those of their disubstituted analogs are explained by agostic interaction between the metal atom and the C-H bond in the reaction transition state and by steric effects. The results obtained attest that the reaction with alkynes occursvia intermediates containing halide bridges and that ₃-halide complexes are more reactive than ₂-halide complexes.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 9, pp. 1540–1545, September, 1994.This work was supported by a Presidential Grant from Northwestern University. One of the authors (F. Basolo) wishes to thank Academician M. E. Vol'pin for the invitation to participate in the Workshop The Modern Problems of Organometallic Chemistry (INEOS-94) and Academician O. M. Nefedov for the invitation to publish a review in theRussian Chemical Bulletin.     

Determination of heavy metal concentration in feed and permeate streams of polymer enhanced ultrafiltration process

Polymer enhanced ultrafiltration (PEUF) is a newly developed method for the removal of heavy metals from aqueous solutions. This method was applied for the removal of mercury and cadmium with the presence of polyethyleneimine (PEI) as a water soluble polymer. After ultrafiltration experiments for metal–polymer mixtures, two separate streams, namely, retentate and permeate, former of which contains mainly metal–polymer complex and free polymer molecules while latter of which mainly contains free metal ions, were obtained. At the end of PEUF experiments, performance of operation was determined by concentration analyses which was achieved by atomic absorption spectroscopy (AAS) applied in a different way for permeate and retentate streams considering the effect of presence of polymer. For mercury analysis, cold vapor AAS was applied. It was observed that the presence of PEI did not affect the atomic absorption signal when 10% HCl was added to the sample solutions. For calcium and cadmium, flame AAS was used. It was observed that change in PEI concentration results in change in measured concentration of calcium and cadmium. Therefore, two new approaches were developed for accurate measurement of concentrations of calcium and cadmium. It was also observed that presence of other metals did not affect the accuracy of the measurement of a particular metal in the concentration range studied.