A stereocontrolled synthesis of delta-trans-tocotrienoloic acid

[reaction: see text] A concise stereoselective total synthesis of a naturally occurring polymerase beta inhibitor, delta-trans-tocotrienoloic acid (2), is described. The key step in the synthesis is an acid-catalyzed cyclodehydration reaction. Additionally, this report corrects a previously reported structural assignment, defines the absolute stereochemistry of 2, and defines key structural requirements for polymerase beta inhibition.     

Foldamer dynamics expressed via Markov state models. II. State space decomposition

The structural landscape of poly-phenylacetylene (pPA), otherwise known as m-phenylene ethynylene oligomers, has been shown to consist of a very diverse set of conformations, including helices, turns, and knots. Defining a state space decomposition to classify these conformations into easily identifiable states is an important step in understanding the dynamics in relation to Markov state models. We define the state decomposition of pPA oligomers in terms of the sequence of discretized dihedral angles between adjacent phenyl rings along the oligomer backbone. Furthermore, we derive in mathematical detail an approach to further reduce the number of states by grouping symmetrically equivalent states into a single parent state. A more challenging problem requires a formal definition for knotted states in the structural landscape. Assuming that the oligomer chain can only cross the ideal helix path once, we propose a technique to define a knotted state derived from a helical state determined by the position along the helical nucleus where the chain crosses the ideal helix path. Several examples of helical states and knotted states from the pPA 12-mer illustrate the principles outlined in this article.     

First soluble M@C60 derivatives provide enhanced access to metallofullerenes and permit in vivo evaluation of Gd@C60[C(COOH)2]10 as a MRI contrast agent

M@C(60) and related endohedral metallofullerenes comprise a significant portion of the metallofullerene yield in the traditional arc synthesis, but their chemistry and potential applications have been largely overlooked because of their sparse solubility. In this work, procedures are described to solublize Gd@C(60) species for the first time by forming the derivative, Gd@C(60)[C(COOCH(2)CH(3))(2)](10), and its hydrolyzed water-soluble form, Gd@C(60)[C(COOH)(2)](10). Imparting water solubility to Gd@C(60) permits its evaluation as a magnetic resonance imaging (MRI) contrast agent. Relaxometry measurements for Gd@C(60)[C(COOH)(2)](10) reveal it to possess a relaxivity (4.6 mM(-1) s(-1) at 20 MHz and 40 degrees C) comparable to that of commercially available Gd(III) chelate-based MRI agents. An in vivo MRI biodistribution study in a rodent model reveals Gd@C(60)[C(COOH)(2)](10) to possess the first non-reticuloendothelial system (RES) localizing behavior for a water-soluble endohedral metallofullerene species, consistent with its lack of intermolecular aggregation in solution as determined by light-scattering measurements. This first derivatization and use of a M@C(60) species suggests new potential for metallofullerene technologies by reducing reliance on the chromatographic purification procedures normally employed for the far less abundant M@C(82) and related endohedrals. The recognition that water-soluble fullerene derivatives can be designed to avoid high levels of RES uptake is an important step toward fullerene-based pharmaceutical development.     

Spectroscopic investigation of a new hybrid glass formed by the interaction between croconate ion and calcium polyphosphate

In this work, a new organic-inorganic hybrid material has been synthesized by the incorporation of croconate ion into a calcium polyphosphate coacervate. The hybrid so obtained was characterized by means of electronic and vibrational spectroscopies. The material is a homogeneous mixture described by a structural model, which includes helical chains of polyphosphate ions, where the calcium ion occupies the internal vacancies of the structure. The croconate ion appears to be occupying the regions outside the polymeric structure, surrounded by several water molecules. The electronic spectrum of the incorporated material shows a broad band peaking at the same wavelength region (363 nm) observed for the aqueous solution of croconate ion, and manifesting the Jahn-Teller effect as evidenced by the doublet structure of the band. The infrared spectrum is widely dominated by the absorption bands of the polyphosphate ion and the appearance of the carbonyl stretching band at ca. 1550 cm(-1) indicates the presence of croconate ion incorporated in the structure. The Raman spectrum of the material shows several vibrational bands related to the oxocarbon moiety; most of them are shifted in comparison with the free ion. These shifts can be understood in terms of strong hydrogen bonding interactions between water molecules and the oxocarbon moiety. The low temperature methodology proposed here can be well used in the preparation of new phosphate glasses containing organic moieties opening the route to an entirely new class of hybrid glasses.     

Water-soluble camptothecin derivatives that are intrinsic topoisomerase I poisons

[structure: see text] In an effort to improve the water solubility of camptothecin, four 20-O-phosphate and phosphonate analogues have been prepared. These analogues are freely water soluble, stable at physiological pH, and stabilize the human topoisomerase I-DNA covalent binary complex with the same sequence selectivity as camptothecin itself. All four compounds inhibited the growth of yeast expressing human topoisomerase I in an enzyme-dependent fashion.     

Metal Cation Transport Studies Comparing Dibenzo-18-crown-6 (DB18C6) with N,N,N′,N′-Tetrakis (n-propyl)-2,3- naphthalenedioxydiacetamide (NPr)

The previously synthesized3,6-dioxa-4,5-disubstitutedoctanedicarboxamides including NPr bind cationsin methanol in the order: Ca²⁺ > Sr²⁺ >Ba²⁺ > Mg²⁺ > Na⁺,K⁺. These compounds also extract Group II cations better thanGroup I cations from water to dichloromethane. In contrast, thesediacetamides were found by W. Simon et al., to sense Na⁺ >Ca²⁺ when they were incorporated into ion-selective electrodesusing a low dielectric constant solvent. It was of interest to determine theorder of Group I and Group II cation transport rates of these compoundsusing a three-phase system with a liquid organic phase of low dielectricconstant. We now report that NPr transports thiocyanates in such a systemusing dichloromethane in the order K⁺ (7.2) >Ca²⁺ (6.6) > Ba²⁺ (5.8) > Na⁺(1). The transport rate for KSCN with DB18C6 is 20.5 times faster than withNPr.     

A discussion on mean excess plots

The mean excess plot is a tool widely used in the study of risk, insurance and extreme values. One use is in validating a generalized Pareto model for the excess distribution. This paper investigates some theoretical and practical aspects of the use of the mean excess plot.     

Fingerprint analysis and the application of HPTLC to the determination of identity and quality of botanicals, from an industry perspective

There are many examples of botanical identity methodology currently in use today; all have associated levels of confidence and, hence, application for their intended purpose. This paper addresses the application of some of these methods to identify and qualify commonly traded herbs. The relevance of botanical identity and quality within the dietary supplement industry has seen a dramatic increase in the last several years, and now with the current Good Manufacturing Practices (cGMPs) recently published and the requirement for 100% identity testing, there is an increased need for reliable methods of analysis and subsequent interpretation of the results or data derived from these methods, given the diversity of samples and matrixes seen on a daily basis in a commercial setting. Example applications of methods described herein illustrate how one can confidently and effectively satisfy the 100% identity rule of the cGMPs to identify crude raw materials and their powdered or liquid extracts as well as identify a majority of such ingredients in finished products with diverse matrixes. The three techniques discussed in this paper are viewed from a qualitative perspective with primary emphasis on the application of HPTLC to a variety of complex samples with varying degrees of difficulty of analysis and interpretation. The three methods discussed are (1) HPTLC, for its fingerprint/pattern recognition capabilities as well as marker compound analysis; (2) microscopy, for identification/recognition of unique cellular, anatomic features and characteristics of the target plant or adulterants; and (3) HPLC for marker compound identification, quantitation, and/or other fingerprint qualities it may contribute to the data set. To support the applications and methods described herein, this paper presents four key approaches to assist in the interpretation of the data collected in order to correctly determine the identity of botanicals and their powdered extracts: the "marker approach," the "multicomponent-based approach", the "pattern approach," and the "multipattern approach", and how these approaches can be used with a vanguard/rearguard strategy in analytical testing as well as forming a basis for the "functional fingerprint" and the concept of phytoequivalence.     

Breakup of air bubbles in water: memory and breakdown of cylindrical symmetry

Using high-speed video, we have studied air bubbles detaching from an underwater nozzle. As a bubble distorts, it forms a thin neck which develops a singular shape as it pinches off. As in other singularities, the minimum neck radius scales with the time until the breakup. However, because the air-water interfacial tension does not drive the breakup, even small initial cylindrical asymmetries are preserved throughout the collapse. This novel, nonuniversal singularity retains a memory of the nozzle shape, size, and tilt angle. In the last stages, the air appears to tear instead of pinch.