Pyranosyl-RNA (‘p-RNA’): NMR and Molecular-Dynamics Study of the Duplex Formed by Self-pairing of Ribopyranosyl-(C-G-A-A-T-T-C-G)

The solution structure of the duplex formed by self-pairing of the p-RNA octamer β-D -ribopyranosyl-(2′→4′)-(CGAATTCG) was studied by NMR techniques and, independently, by molecular-dynamics calculations. The resonances of all non-exchanging protons, H-bearing C-atoms, P-atoms, and of most NH protons were assigned. Dihedral angle and distance constraints derived from coupling constants and NOESY spectra are consistent with a single dominant conformer and corroborate the main structural features predicted by qualitative conformational analysis. The duplex displays Watson-Crick pairing with antiparallel strand orientation. The dihedral angles β and ? in the phosphodiester linkages differ considerably from the idealized values. Model considerations indicate that these deviations from the idealized model allow better interstrand stacking and lessen unfavorable interactions in the backbone. The average base-pair axis forms an angle of ca. 40° with the backbone. The resulting interstrand π-π stacking between either two purines, or a purine and a pyrimidine, but not between two pyrimidines, constitutes a characteristic structural feature of the p-RNA duplex. A 1000-ps molecular-dynamics (MD) calculation with the AMBER force field resulted in an average structure of the same conformation type as derived by NMR. For the backbone torsion angle ?, dynamically averaged coupling constants from the MD calculation agree well with the experimental values, but for the angle β, a systematic difference of ca. 25° remains. The two base pairs at the ends of the duplex are calculated to be highly labile, which is consistent with the high exchange rate of the corresponding imino protons found by NMR.     

Effect on pKa of metal-bound water molecules in lanthanide ion-induced cyclen "cavities"

[reaction: see text] The macrocyclic cyclen conjugates 1-4 were synthesized with the aim of forming lanthanide ion-based macrocyclic conjugates possessing deep cavities, formed upon complexation to various lanthanide ions. These complexes all possess metal-bound water molecules, where the pKa of the water molecules depends on the nature of the cavity.     

Preparation of six isomeric bis-acylporphyrins with chromophores reaching the near-infrared via intramolecular Friedel-Crafts reaction

We describe the preparation of six diketones based on the frameworks of five bis-naphthoporphyrins and one perinaphthoporphyrin. All diketones derive from meso-tetraarylporphyrins having incorporated two carbonyl groups, each one connected to one beta-pyrrole carbon and one ortho carbon atom from a meso-aryl group. These compounds were all produced in good yield by intramolecular Friedel-Crafts acylation, either from porphyrins meso-substituted by o-carboxyphenyl or o,o'-dicarboxyphenyl substituents or from porphyrins bearing carboxy groups attached to the pyrrolic beta-positions. Although the former reaction does not show significant regioselectivity when run on nickel complexes, the opposite is true for the corresponding free bases. All diketones show a spectacular bathochromic shift of the UV-vis absorption, the longest wavelength bands absorbing in the 700-825 nm range. Two compounds were structurally characterized by X-ray diffraction. In the case of the diketone, whose carbonyl groups are attached to vicinal pyrrolic beta-positions, a significant intermolecular interaction between the two carbonyl groups and an aromatic hydrogen atom was detected.     

Direct alkenylation of non-aromatic enamides via palladium-catalyzed oxidative coupling: Synthetic developments and applications

Direct C(3) alkenylation of non-aromatic enamides through palladium(II)-catalyzed Fujiwara–Moritani cross-coupling was developed. The reaction scope includes a range of cyclic enamides as well as activated alkenes. The utility of this methodology is illustrated by the synthesis of octa- or tetrahydroquinoline cores obtained from conjugated enamides via Diels–Alder cycloaddition.     

Influence of the particle size of the MgCl2 support on the performance of Ziegler catalysts in the polymerization of ethylene to ultra‐high molecular weight polyethylene and the resulting polymer properties

A highly systematic size series of Ziegler catalysts with similar porosities and surface textures are synthesized by varying the stirring speed during the MgCl₂ support synthesis. Besides the mean particle size, the only substantial difference observed between the various catalysts is the size and number of nodules per particle. Varying the mean diameter of the catalyst particles between 1.5 and 11.9 µm, leads to a pronounced impact on the activity in ultra‐high molecular weight polyethylene (UHMWPE) polymerization, while the M_w capabilities are only affected to a limited extend. In addition, it is observed that both the M_ws as the polymer bulk density (BD) increases during the course of the polymerization. This particularity allows to optimize the M_w and/or BD at a set polymer size, by tuning the catalyst particle size. This is particularly interesting in UHMWPE production, as control of the morphological and structural properties of the UHMWPE reactor powders are critical for efficient processing as well as the performance of the final product. © 2017 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2017 , 55, 2679–2690     

Rheological and thermal behaviours of a hyperbranched polycarbosilane

A hyperbranched polymer, a precursor of silicon carbide (SiC), was successfully synthesized using a hydrosilylation reaction with Karstedt's catalyst. This reaction was optimized with the use of a rheometer coupled with an infrared spectrometer. The polymeric precursor was characterized using NMR and Fourier transform infrared spectroscopies, and dynamic rheology. The polymerization reaction was followed in situ by combined rheological and infrared measurements, indicating a gel‐like behaviour for alkene conversions higher than 0.55. Overall second‐order kinetics was determined for the hydrosilylation reaction. Pyrolysis at 1400 °C led to porous materials with β‐SiC and free carbon.     

A mechanistic study of the chromium(II)-mediated transformations of trichloromethyl alkyls and carbinols: evidence for carbene, carbyne, and carbenoid intermediates

Using CrCl₂ in THF at room temperature, trichloromethyl carbinols and trichloromethylalkanes are readily transformed to the highly reactive α-chlorocarbenes, carbynes and α-chloro-α-chromium(III) vinylidene carbenoids. A mechanistic study is carried out to determine the nature of the intermediates.     

Analogues of cytotoxic squamocin using reliable reactions: new insights into the reactivity and role of the α,β-unsaturated lactone of the annonaceous acetogenins

A small library of squamocin analogues has been prepared and screened biologically (cytotoxicity, inhibition of mitochondrial complex I and complex III). To centre diversity on a crucial part of the molecule (i.e., the α,β-unsaturated lactone), an original and reliable lactone opening reaction has been discovered and exploited among other efficient reactions.