Investigation of the triplet states of DNA by optical detection of magnetic resonance using a new slow passage technique

A new method to obtain slow passage ODMR signals under otherwise impeding conditions is described. The technique is applied to identify the triplet state of DNA as thymine. The zero field splitting constants measured are |D| = (0.203 ± 0.003) cm^?1, and |E| ? (0.0123 ± 0.0005) cm^?1. From microwave-induced delayed phosphorescence and slow passage measurements a preliminary kinetic scheme for the triplet state is derived.     

Gas separation membranes plasma-polymerized from perfluoromethylcyclohexane/methane mixture

Plasma-polymerizations of perfluoromethylcyclohexane (PFMCH)/methane (CH₄) mixture were investigated by elemental analysis, infrared spectroscopy, and ESCA; and gas transport characteristics of the plasma-films formed were studied. The addition of CH₄ molecules to PFMCH accelerated defluorination to form plasma-polymers poor in fluorocarbon units. The surface energy of the plasma-polymers increased with increasing the CH₄ concentration. The oxygen and nitrogen permeation coefficients (P_O2 and P_N2) and the P_O2/P_N2 ratio for the polymer films formed from the PFMCH/CH₄ mixture depended on the CH₄ concentration. The small CH₄ addition was effective in improvement of the P_O2 value and of the P_O2/P_N2 ratio, but the much addition was ineffective. The oxygen transport through the plasma-polymers was discussed.     

Kinetics of transient end-to-end contact of single-stranded DNAs

The formation of the pyrene (Py) dimer radical cation (Py(2)(*+)) was used to measure the kinetics of the intrastrand end-to-end contact rates of single-stranded DNAs (ssDNAs) in the 10 nanoseconds to the tens of microseconds time range. ssDNAs labeled with Py at both ends with the lengths of 3, 6, and 9 mer were synthesized, and the two-photon ionization method was employed to generate a Py(*+), which enables the measurements of the end-to-end contact rates from 10 ns. The formation rate of Py(2)(*+) depended on the length and the sequence of the ssDNAs, and about 1 order of magnitude faster rates were observed for the T-rich ssDNAs compared to those for the corresponding length of A-rich ssDNAs, showing that ssDNA made from adenines is much more rigid than that composed of thymidines. As for the T-rich ssDNAs, the formation of Py(2)(*+) attributed to the misfolded structures was also observed, which is consistent with the configurational diffusion model suggested by Ansari and co-workers.     

Differences in the electrorheological response of a particle suspension under direct current and alternating current electric fields

We have observed an unusual reduction of shear stress with increasing shear rate under direct current electric fields, for an electrorheological fluid composed of sulfonated poly(styrene-co-divinylbenzene) particles dispersed in silicone oil. At all shear rates, the shear stress under the electric field is larger than that in the absence of the field, indicating that there is still some field-induced agglomeration of the particles. In contrast, the behavior under alternating current electric fields is the Bingham-fluid-type response commonly observed with electrorheological fluids. It is suggested that the conventional dipole–dipole interaction approach based on simplified microstructural models would be unable to explain these phenomena. Received: 27 November 2000 Accepted: 22 May 2001     

Conformational Studies on Polytripeptides as a Model of Collagen

To study the role of glycine residues in stabilizing the collagen triple helix, the glycine residues in the polytripeptide (Pro-Ala-Gly)_n were partially replaced by alanine. The proline content was kept constant. The stability of the helical conformation of these polypeptides was studied by IR- and X-ray measurements in the solid state and by ORD, CD and viscometry in solution. The renaturation was followed as a function of time. All the polytripeptides studied, with the exception of (-Pro-Ala-Ala-)_n attained the polyproline II conformation. However the stability decreased with increasing alanine content. Obviously the molecules of (-Pro-Ala-Gly-) are highly associated by intermolecular hydrogen bonds and one may therefore suppose that a triple-stranded helix aggregation occurs. The results of the refolding process show that the stability of the helices seems to also affect the refolding rate in terms of the optical rotation, Two transitions appeared: the first one is responsible for a rapid reversible change in conformation and the second one for a further slow and irreversible change in the hydrodynamic shape. The latter seems to be due to the partial helical nature, leading to higher chain mobility.     

A study of Feynman integrals by micro-differential equations

We use the holonomic character of Feynman integrals to describe their singularity structure explicitly in some simple cases. The results in §1 show that under moderate conditions Feynman amplitudes can be locally expressed essentially in terms of Legendre functions near the points where two positive- Landau-Nakanishi surfaces meet. Related topics such as hierarchical principle in perturbation theory are also discussed in terms of holonomic systems involved. In §4 we use the concrete expressions for Feynman amplitudes obtained in §1 to discuss the validity of Sato's conjecture.Supported in part by NSF MCS 75-2333Supported in part by NSF GP 36269     

Synthesis of195mPt radiolabelled cis-diamminedichloroplatinum/II/ of high chemical and radiochemical purity using high performance liquid chromatography

An improved method is described for the synthesis of^195mPt-radiolabelled cis-diamminedichloroplatinum/II. An amount of 10 mg of 95% enriched¹⁹⁴Pt was irradiated for 75 h in the hydraulic conveyer of the KUR at a thermal neutron flux of approximately 8.15×10¹³ n.cm^–2.sec^–1 and the^195mPt-radiolabelled CDDP was purified using HPLC. The chemical yield is 61% its chemical purity is greater than 99.74% the radiochemical purity is nearly 100%, and the specific activity is 7.4×10⁶ Bq mg^–1 CDDP/200 Ci mg^–1 CDDP/.     

NMR study on the photoresponsive DNA tethering an azobenzene. Assignment of the absolute configuration of two diastereomers and structure determination of their duplexes in the trans-form

Two diastereomers of a photoresponsive oligodeoxyribonucleotide tethering a trans-azobenzene, based on the chirality of the central carbon of a diol linker, were separated by reversed-phase HPLC. On the basis of 2D NMR analysis, absolute configurations of the diastereomers alpha and beta (tentatively designated from differences in their retention time) were determined as R- and S-forms, respectively. For both diastereomers, their NMR-determined duplex structure showed that trans-azobenzene intercalates between base pairs, because distinct NOEs were observed between the protons of azobenzene and those of the adjacent base pairs, such as with the imino protons and methyl protons of thymine. The melting temperatures of both duplexes were higher than that of the corresponding native duplex, which contained no azobenzene residue, due to the intercalated trans-azobenzene stabilizing the duplex by a stacking interaction. Between these two diastereomers, differences in T(m) were also found: the melting temperature of the R-form duplex (alpha-isomer) was higher than that of the S-form (beta-isomer). On the basis of the NMR-determined structure, this difference was attributed to the fact that the S-form (beta isomer) causes more stress forming the duplex than does the R-form (alpha isomer) due to disturbances of the right-hand helix.     

Metal-assisted stabilization and probing of collagenous triple helices

Collagen model peptides that contain 2,2'-bipyridyl (bpy) ligands were designed and synthesized. The thermal stability of the collagenous triple helix was increased by forming an Fe(II)(bpy-peptide)(3) complex. The chirality of the metal center was shifted to form right-handed Delta-isomers induced by the supercoiling of the peptide moiety. Moreover, the refolding rate of the triple helix was increased in the presence of Fe(II). This metal-coordinating system possesses potential to be used to stabilize the triple-helical conformation as well as to probe the folding status of collagen model peptides.