Cloning of poly(aspartic acid) (PAA) hydrolase-1 gene from Pedobacter sp. KP-2 and hydrolysis of thermally synthesized PAA by its gene product

Pedobacter sp. KP-2 can degrade and metabolize thermally synthesized alpha,beta-poly(D,L-aspartic acid) (tPAA), which contains 70% of unnatural beta-amide units, with high-molecular-weight. In this study, gene cloning and molecular characterization of PAA hydrolase-1 from KP-2 was carried out. Gene analysis reveals that deduced amino acid sequence of the enzyme shows a similarity to only that of PAA hydrolase-1 from Sphingomonas sp. KT-1. GPC and NMR analyses of the hydrolyzed products of tPAA by PAA hydrolase-1 of KP-2 indicate that this enzyme cleaves the beta-beta amide linkage via endo-mode to yield oligo(aspartic acid) from tPAA. Taking the composition of tPAA and the substrate specificity of PAA hydrolase-1 into consideration, the enzyme possibly plays a crucial role in tPAA biodegradation by KP-2.     

Properly coloured copies and rainbow copies of large graphs with small maximum degree

Let G be a graph on n vertices with maximum degree Δ. We use the Lovász local lemma to show the following two results about colourings χ of the edges of the complete graph K_n. If for each vertex v of K_n the colouring χ assigns each colour to at most (n ‐ 2)/(22.4Δ²) edges emanating from v, then there is a copy of G in K_n which is properly edge‐coloured by χ. This improves on a result of Alon, Jiang, Miller, and Pritikin [Random Struct. Algorithms 23(4), 409–433, 2003]. On the other hand, if χ assigns each colour to at most n/(51Δ²) edges of K_n, then there is a copy of G in K_n such that each edge of G receives a different colour from χ. This proves a conjecture of Frieze and Krivelevich [Electron. J. Comb. 15(1), R59, 2008]. Our proofs rely on a framework developed by Lu and Székely [Electron. J. Comb. 14(1), R63, 2007] for applying the local lemma to random injections. In order to improve the constants in our results we use a version of the local lemma due to Bissacot, Fernández, Procacci, and Scoppola [preprint, arXiv:0910.1824]. © 2011 Wiley Periodicals, Inc. Random Struct. Alg., 40, 425–436, 2012     

Sound field characteristics of underground railway stations – Effect of interior materials and noise source positions

In the case of most underground railway stations, no acoustical solutions are used to reduce train noise. Because the reflecting features of train noise in an underground station are not known, appropriate methods for controlling these features have yet to be established. The aim of this study was to clarify the sound field characteristics of underground stations by putting a sound source and receiver on the railway track and platform, respectively. The impulse responses for two vacant underground stations were measured to clarify the effects of the interior materials of the station (Comparison I), and the sound source was put in each station and tunnel to clarify the effect of the noise source positions (Comparison II). Results showed that the sound fields were similar between the stations whose lateral walls were covered with either metallic or fire-resistant wooden panels (Comparison I), and that the sound field for the sound sources near or in the tunnel presented a higher strength (G) by 5.1 dB and longer reverberation time (EDT) by 0.7 s compared to the sound source in the station (Comparison II). The sound sources in the tunnel presented strong and long reverberations at around 500 Hz due to the convergence effect of the tunnel. Therefore, this study proposes a platform screen with doors to limit noise transmission into the platform.     

Mechanical Properties of Uniaxially Cold-Drawn Films of Poly[(R)-3-hydroxybutyrate] and Its Copolymers

Uniaxially oriented films of poly[(R)-3-hydroxybutyrate] (P(3HB)) and two kind of copolymers, poly[(R)-3-hydroxybutyrate-co-8%-[R]-3-hydroxyvalerate] (P(3HB-co-8%-3HV)), and poly[(R)-3-hydroxybutyrate-co-[R]-5%-3-hydroxyhexanoate] (P(3HB-co-5%-3HH)), were prepared by cold-drawing from amorphous preforms at temperatures near to the respective glass transition temperatures. Melt-quenched films in a rubber state could be stretched reproducibly to a draw ratio of 500%∼1800%, and subsequent annealing under tension led to improvement of the tensile strength and Young's modulus. Two-step drawing resulted in further improvement of the mechanical properties. The mechanical properties remained unchanged after storing for 6 months at room temperature, suggesting that high orientation and crystallinity suppress the secondary crystallization.     

Real-time enzymatic degradation study of poly[(R)-3-hydroxybutyric acid] copolymer thin film by atomic force microscopy in buffer solution

In situ observation of lamellar crystals during the enzymatic degradation by poly(hydroxybutyrate) (PHB) depolymerase is carried out on the thin films of poly[((R)-3-hydroxybutyric acid)-co-(16 mol-%-(R)-3-hydroxypentanoic acid)] using atomic force microscopy in buffer solution. Erosion of lamellar crystals and formation of splintered morphology along the crystal growth direction are directly observed during the course of the enzymatic degradation process. The changes in lamellar morphologies caused by enzymatic degradation are discussed in terms of lamellar crystal growth process.

AFM images of a P[(R)-3HB-co-(R)-3HV] thin film before and during enzymatic degradation.     

Crystalline morphology and thermal properties for random copolyesters of (R)‐3‐hydroxybutyric acid with different hydroxyalkanoic groups

The solid‐state structures and thermal properties of melt‐crystallized films of random copolymers of (R)‐3‐hydroxybutyric acid (3HB) with different hydroxyalkanoic acids such as (R)‐3‐hydroxypentanoic acid (3HV), (R)‐3‐hydroxyhexanoic acid (3HH), medium‐chain‐length (R)‐3‐hydroxyalkanoic acids (mcl‐3HA; C8‐C12), 4‐hydroxybutyric acid (4HB), and 6‐hydroxyhexanoic acid (6HH) were characterized by means of small‐angle X‐ray scattering, differential scanning calorimetry, and optical microscopy. The randomly distributed second monomer units except for 3HV in copolyesters act as defects of P(3HB) crystal and are excluded from the P(3HB) crystalline lamellae. The lamellar thickness of copolymers decreased with an increase in either the main‐chain or the side‐chain carbon numbers of second monomer units. In addition, the growth rate of spherulites decreased with an increase in the carbon numbers of second monomer units for copolymers with an identical comonomer composition. These results indicate that the steric bulkiness of second monomer unit affects on the crystallization of 3HB segments in random copolyesters.     

Tailoring of block copolymers based on the stoichiometric control of the end‐functionality of telechelic oligomers and the utilization of large‐scale fractionation by phase fluctuation chromatography: A synthetic strategy for the preparation of end‐functionalized poly(L‐lactide)‐block‐poly(oxyethylene)

An AB diblock copolymer of poly(L ‐lactide) (PLLA) and poly(oxyethylene) (PEG) with a cinnamate terminal in the PEG block was prepared by the copolymerization of L ‐lactide and partially end‐modified PEG followed by fractionation. The first step was the terminal modification of PEG with cinnamoyl chloride (CC), in which the degree of cinnamoylation of the hydroxyl terminals of PEG was roughly controlled by the feed ratio of both reactants. The resultant PEG cinnamate was subjected to copolymerization with L ‐lactide to produce a mixture of unreacted PEG dicinnamate (C‐PEG‐C), the diblock copolymer (PLLA‐PEG‐C), and the triblock copolymer (PLLA‐PEG‐PLLA) corresponding to the three components of the PEG cinnamate. This mixture was separated by phase fluctuation chromatography (PFC) to obtain PLLA‐PEG‐C in sufficient purity. This process, involving the stoichiometric control of the terminal reaction of telechelic oligomers and the utilization of PFC for fractionation, can be an efficient method for synthesizing end‐functionalized diblock copolymers from readily available telechelic oligomers. © 2000 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 38: 2405–2414, 2000     

Isomerization polymerization and copolymerization of glycidyl alkanoates catalyzed by methylaluminum bis(2,6‐di‐t‐butyl‐4‐methylphenoxide)

The isomerization polymerizations of glycidyl propionate (1b), octanoate (1c), and stearate (1d) with methylaluminum bis(2,6‐di‐tert‐butyl‐4‐methylphenoxide) (3) were investigated. The polymerizations selectively gave poly(2‐alkyl‐1,3‐dioxolane‐4,2‐diyloxymethylene)s (2), although the polymer yield as well as the polymer molecular weight significantly decreased as the acyl chain of 1 was lengthened. These polymers readily hydrolyzed to glycerin and the corresponding fatty acids under mild conditions. The copolymerizations of glycidyl acetate (1a) with these monomers were also examined. In any combination, the composition of the obtained copolymer was essentially identical with the feed ratio, while both copolymer yield and molecular weight decreased as the feed of 1a was decreased. © 1999 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 37: 435–444, 1999 (See graphics.)