Computing steady-state metal flux at microorganism and bioanalogical sensor interfaces in multiligand systems. A reaction layer approximation and its comparison with the rigorous solution

In complicated environmental or biological systems, the fluxes of chemical species at a consuming interface, like an organism or an analytical sensor, involve many coupled chemical and diffusion processes. Computation of such fluxes thus becomes difficult. The present paper describes an approximate approach, based on the so-called reaction layer concept, which enables one to obtain a simple analytical solution for the steady-state flux of a metal ion at a consuming interface, in the presence of many ligands, which are in excess with respect to the test metal ion. This model can be used for an unlimited number of ligands and complexes, without limit for the values of the association/dissociation rate constants or diffusion coefficients. This approximate solution is compared with a rigorous approach for the computation of the fluxes based on an extension of a previously published method (J. Galceran, J. Puy, J. Salvador, J. Cecília, F. Mas and J. L. Garcés, Phys. Chem. Chem. Phys., 2003, 5, 5091-5100). The comparison is performed for a very wide range of the key parameters: rate constants and diffusion coefficients, equilibrium constants and ligand concentrations. Their combined influence is studied in the whole domain of fully labile to non-labile complexes, via two combination parameters: the lability index, L, and the reaction layer thickness, mu. The results show that the approximate solution provides accurate results in most cases. However, for particular combinations of metal complexes with specific values of L or mu, significant differences between the approximate and rigorous solutions may occur. They are evaluated and discussed. These results are important for three reasons: (i) they enable the use of the approximate solution in a fully reliable manner, (ii) when present, the differences between approximate and rigorous solution are largely due to the coupling of chemical reactions, whose importance can thus be estimated, (iii) due to its simple mathematical expression, the individual contribution of each metal species to the overall flux can be computed.     

A computational study of H2 dissociation on silver surfaces: the effect of oxygen in the added row structure of Ag110

We studied computationally the activation of H(2) on clean planar (111), (110) and stepped (221) as well as oxygen pre-covered silver surfaces using a density functional slab model approach. In line with previous data we determined clean silver to be inert towards H(2) dissociation, both thermodynamically and kinetically. The reaction is endothermic by approximately 40 kJ mol(-1) and exhibits high activation energies of approximately 125 kJ mol(-1). However, oxygen on the surface, modeled by the reconstructed surface p(2 x 1)O/Ag(110) that exhibits -O-Ag-O- added rows, renders H(2) dissociation clearly exothermic and kinetically feasible. The reaction was calculated to proceed in two steps: first the H-H bond is broken at an Ag-O pair with an activation barrier E(a) approximately 70 kJ mol(-1), then the H atom bound at an Ag center migrates to a neighboring O center with E(a) approximately 12 kJ mol(-1).     

Density functional embedded cluster study of Cu(4), Ag(4) and Au(4) species interacting with oxygen vacancies on the MgO(001) surface

Cu(4), Ag(4), and Au(4) species adsorbed on an MgO(001) surface that exhibits neutral (F(s)) and charged (F(s) (+)) oxygen vacancies have been studied using a density functional approach and advanced embedding models. The gas-phase rhombic-planar structure of the coinage metal tetramers is only moderately affected by adsorption. In the most stable surface configuration, the plane of the tetramers is oriented perpendicular to the MgO(001) surface; one metal atom is attached to an oxygen vacancy and another one is bound to a nearby surface oxygen anion. A very similar structural motif was recently found on defect-free MgO(001), where two O(2-) ions serve as adsorption sites. Following the trend of the interactions with the regular MgO(001) surface, Au(4) and Cu(4) bind substantially stronger to F(s) and F(s) (+) sites than Ag(4). This stronger adsorption interaction at oxygen vacancies, in particular at F(s), is partly due to a notable accumulation of electron density on the adsorbates. We also examined the propensity of small supported metal species to aggregate to adsorbed di-, tri- and tetramers. Furthermore, we demonstrated that core-level ionization potentials offer the possibility for detecting experimentally supported metal tetramers and characterizing them structurally with the help of calculated data.     

First trinuclear paramagnetic transition metal complexes with redox active ligands derived from TTF: Co2M(PhCOO)6(TTF-CH=CH-py)2.2CH3CN, M = CoII, MnII

The first paramagnetic homo- and hetero-metallic trinuclear complexes with redox active ligands derived from TTF are synthesized, the central metal ion has an octahedral coordination sphere while the outer Co(II) ions are in a distorted bipyramidal surrounding, bearing TTF-ligands, the magnetic properties show antiferromagnetic coupling leading to a magnetic ground state.     

Iron-catalyzed oxidation of thioethers by iodosylarenes: stereoselectivity and reaction mechanism

Catalytic properties of a series of iron(III)-salen (salen=N,N'-bis(salicylidene)ethylenediamine dianion) and related complexes in asymmetric sulfoxidation reactions, with iodosylarenes as terminal oxidants, have been explored. These catalysts have been found to efficiently catalyze oxidation of alkyl aryl sulfides to sulfoxides with high chemoselectivity (up to 100 %) and moderate-to-high enantioselectivity (up to 84 % with isopropylthiobenzene and iodosylmesitylene), the TON (TON=turnover number) approaching 500. The influence of the ligand (electronic and steric effects of the substituents), oxidant, and substrate structures on the oxidation stereoselectivity has been investigated systematically. The structure of the reactive intermediates (complexes of the type [Fe(III)(ArIO)(salen)] and the reaction mechanism have been revealed by both mechanistic studies with different iodosylarenes and direct in situ (1)H NMR observation of the formation of the reactive species and its reaction with the substrate.     

Atmospheric pressure ionization permanent magnet fourier transform ion cyclotron resonance mass spectrometry

A new Fourier transform ion cyclotron resonance mass spectrometer based on a permanent magnet with an atmospheric pressure ionization source was designed and constructed. A mass resolving power (full-width-at-half-maximum) of up to 80,000 in the electron ionization mode and 25,000 in the electrospray mode was obtained. Also, a mass measurement accuracy at low-ppm level has been demonstrated for peptide mixtures in a mass range of up to 1200 m/z in the isotopically resolved mass spectra.     

Shape and buckling transitions in solid-stabilized drops

We study shape and buckling transitions of particle-laden sessile and pendant droplets that are forced to shrink in size. Monodisperse polystyrene particles were placed at the interface between water and decane at conditions that are known to produce hexagonal, crystalline arrangements on flat interfaces. As the volumes of the drops are reduced, the surface areas are likewise diminished. This effectively compresses the particle monolayer coating and induces a transition from a fluid film to a solid film. Since the particles are firmly attached to the interface by capillary forces, the shape transitions are reversible and shape/volume curves are the same for drainage and inflation. Measurements of the internal pressure of the drops reveal a strong transition in this variable as the buckling transition is approached.     

93Nb NMR chemical shift scale for niobia systems

⁹³Nb solid-state NMR spectra of a series of inorganic niobates with Nb in different oxygen coordination environments were measured. For all studied compounds the chemical shielding and quadrupole tensor parameters were determined using conventional and ultrahigh field NMR facilities, ultrahigh speed MAS, DQ STMAS, solid-echo and computer modeling. It has been demonstrated that the ⁹³Nb isotropic chemical shift is sensitive to the coordination number of Nb sites. For the first time the ⁹³Nb NMR chemical shift scale for NbO_x polyhedra in solid materials has been proposed: for four-coordinated Nb sites, the isotropic shifts occur from −650 to −950 ppm; five-coordinated Nb sites have the isotropic shifts in the range of –900 to –980 ppm; for six-coordinated Nb sites the isotropic shifts vary from −900 to −1360 ppm; the shifts from −1200 to −1600 ppm are typical for seven-coordinated Nb sites; for eight-coordinated Nb sites the shifts are higher than −1400 ppm. The possible correlation between the value of the isotropic chemical shift and the ionic character of the NbO_x–MO_y polyhedra association has been suggested. The magnitude of the ⁹³Nb quadrupole coupling constant depends on the local symmetry of Nb sites and may vary from hundreds of kHz to hundreds of MHz.     

Solvability of the Hamiltonians Related to Exceptional Root Spaces: Rational Case

Solvability of the rational quantum integrable systems related to exceptional root spaces G₂,F₄ is re-examined and for E_6,7,8 is established in the framework of a unified approach. It is shown that Hamiltonians take algebraic form being written in certain Weyl-invariant variables. It is demonstrated that for each Hamiltonian the finite-dimensional invariant subspaces are made from polynomials and they form an infinite flag. A notion of minimal flag is introduced and minimal flag for each Hamiltonian is found. Corresponding eigenvalues are calculated explicitly while the eigenfunctions can be computed by pure linear algebra means for arbitrary values of the coupling constants. The Hamiltonian of each model can be expressed in the algebraic form as a second degree polynomial in the generators of some infinite-dimensional but finitely-generated Lie algebra of differential operators, taken in a finite-dimensional representation.Alexander V. Turbiner: On leave of absence from the Institute for Theoretical and Experimental Physics, Moscow 117259, Russia.     

In vivo dark-field reflection-mode photoacoustic microscopy

Reflection-mode photoacoustic microscopy with dark-field laser pulse illumination and high-numerical-aperture ultrasonic detection is designed and implemented in noninvasively imaged blood vessels in the skin in vivo. Dark-field optical illumination minimizes the interference caused by strong photoacoustic signals from superficial structures. A high-numerical-aperture acoustic lens provides high lateral resolution, 45-120 microm in this system. A broadband ultrasonic detection system provides high axial resolution, estimated to be approximately 15 microm. The optical illumination and ultrasonic detection are in a coaxial confocal configuration for optimal image quality. The system is capable of imaging optical-absorption contrast as deep as 3 mm in biological tissue.