An experimental survey of a posteriori Courant finite element error control for the Poisson equation

This comparison of some a posteriori error estimators aims at empirical evidence for a ranking of their performance for a Poisson model problem with conforming lowest order finite element discretizations. Modified residual-based error estimates compete with averaging techniques and two estimators based on local problem solving. Multiplicative constants are involved to achieve guaranteed upper and lower energy error bounds up to higher order terms. The optimal strategy combines various estimators.     

Zur Darstellung phosphido‐chalkogenido‐verbrückter Dirheniumkomplexe vom Typ Re2(μ‐PCy2)(μ‐ER)(CO)8 (E = S,Se, Te; R = org. Rest)

Synthesis of Phosphido Chalcogenido Bridged Dirhenium Complexes of the Type Re₂(μ‐PCy₂)(μ‐ER)(CO)₈ (E = S, Se, Te; R = org. Residue) The reaction of Re₂(μ‐Br)(μ‐PCy₂)(CO)₈ with nucleophiles MER (M = Na, Li; E = S, Se, Te; R = org. residue) gives via substitution of the bromido bridge phosphido chalcogenido bridged dirhenium complexes of the general formula Re₂(μ‐PCy₂)(μ‐ER)(CO)₈. The new compounds were characterized by IR, ¹H and ¹³C NMR spectroscopic data and by elemental analyses. In addition the molecular structures for E = S, Se, Te and R = Ph as well as for E = S and R = H, n‐Bu, 2‐pyridyl have been established by single crystal X‐ray analysis. ¹³C NMR spectra of Re₂(μ‐PCy₂)(μ‐EPh)(CO)₈ (E = S, Se, Te) prove that the sulfur and selenium compounds are at room temperature dynamic molecules due to inversion of the pyramidal chalcogenido bridge. The tellurium compound, however, is rigid on the time scale of ¹³C NMR spectroscopy. Eventually the reactivity of the SH function of the novel complex Re₂(μ‐PCy₂)(μ‐SH)(CO)₈ was investigated by reaction with Re₂(CO)₈(MeCN)₂. In toluene at 90 °C the novel spirocyclic complex Re₂(μ‐PCy₂)(CO)₈(μ₄‐S)Re₂(μ‐H)(CO)₈ was formed by SH oxidative addition.     

Entwicklung eines Enzymimmunoassays zur Bestimmung von Prolactin (Enzymun-Test? Prolactin)

Ohne Zusammenfassung

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Enzyme-immunoassay of prolactin, hybridoma characterization

     

Interpretation of mass spectrometry data for high-throughput proteomics

Recent developments in proteomics have revealed a bottleneck in bioinformatics: high-quality interpretation of acquired MS data. The ability to generate thousands of MS spectra per day, and the demand for this, makes manual methods inadequate for analysis and underlines the need to transfer the advanced capabilities of an expert human user into sophisticated MS interpretation algorithms. The identification rate in current high-throughput proteomics studies is not only a matter of instrumentation. We present software for high-throughput PMF identification, which enables robust and confident protein identification at higher rates. This has been achieved by automated calibration, peak rejection, and use of a meta search approach which employs various PMF search engines. The automatic calibration consists of a dynamic, spectral information-dependent algorithm, which combines various known calibration methods and iteratively establishes an optimised calibration. The peak rejection algorithm filters signals that are unrelated to the analysed protein by use of automatically generated and dataset-dependent exclusion lists. In the "meta search" several known PMF search engines are triggered and their results are merged by use of a meta score. The significance of the meta score was assessed by simulation of PMF identification with 10,000 artificial spectra resembling a data situation close to the measured dataset. By means of this simulation the meta score is linked to expectation values as a statistical measure. The presented software is part of the proteome database ProteinScape which links the information derived from MS data to other relevant proteomics data. We demonstrate the performance of the presented system with MS data from 1891 PMF spectra. As a result of automatic calibration and peak rejection the identification rate increased from 6% to 44%.Abbreviations 2-DE Two-dimensional gel electrophoresis - MALDI Matrix-assisted laser desorption ionisation - PMF Peptide mass fingerprinting - MS Mass spectrometry - TOF Time of flight     

Synthese von pyridylphenyl-imidazo[2,1-b]thiazolen

The synthesis of the isomeric 6(5)-phenyl-5(6)-pyridyl-2,3-dihydroimidazo[2,1-b]thiazoles are described. Only the synthesis of 5-phenyl-6-(2-pyridyl)-2,3-dihydroimidazo[2,1-b]thiazole failed.     

Composition and genetic variability of proteins from nuclear fractions of mouse (DBA/2J and C57BL/6J) liver and brain

Proteins from nuclear plasma of mouse liver and brain and from the nuclear membranes of mouse liver were separated by two-dimensional electrophoresis. For the purpose of comparison, liver cytosol proteins were also investigated. The protein samples were prepared from two inbred strains of the mouse (DBA/2J, C57BL/6J) and their hybrids. The patterns obtained were compared with regard to the composition and genetic variability (qualitative and quantitative variants) of proteins from different nuclear fractions and organs. The percentage (greater than 30%) of spots common to different organs (liver, brain), but from the same nuclear fraction (plasma) was greater than the percentage (less than 20%) of spots common to different cell and nuclear fractions (cytosol, nuclear plasma and nuclear membranes) of the same organ (liver). Quantitative genetic variants occurred much more frequently than qualitative genetic variants (5.1% vs. 0.2%; liver nuclear plasma). The incidence of genetic variants was much higher in liver (5.3%) than in brains (0.0%), and higher in solubilized nuclear proteins (5.3%) than in structure-bound nuclear proteins (2.1%).     

Syntheses and oxygenation of iron(II) “strapped” porphyrin complexes

A general route to ‘strapped’ porphyrins which are bridged between diagonally opposite meso-positions is described. Studies on the oxygenation and carbonylation of their iron(II) complexes have shown that they are inferior to ‘capped’ porphyrins as models for the oxygen-carrying haemoproteins. The results reported herein suggest that strapping structures which do not enforce well-defined and rigid cavities for oxygen binding afford little protection against irreversible oxidation of (dioxygen) (porphyrin) iron(II) complexes.     

Dual mechanisms of HNO generation by a nitroxyl prodrug of the diazeniumdiolate (NONOate) class

Here we describe a novel caged form of the highly reactive bioeffector molecule, nitroxyl (HNO). Reacting the labile nitric oxide (NO)- and HNO-generating salt of structure iPrHN-N(O)═NO(-)Na(+) (1, IPA/NO) with BrCH(2)OAc produced a stable derivative of structure iPrHN-N(O)═NO-CH(2)OAc (2, AcOM-IPA/NO), which hydrolyzed an order of magnitude more slowly than 1 at pH 7.4 and 37 °C. Hydrolysis of 2 to generate HNO proceeded by at least two mechanisms. In the presence of esterase, straightforward dissociation to acetate, formaldehyde, and 1 was the dominant path. In the absence of enzyme, free 1 was not observed as an intermediate and the ratio of NO to HNO among the products approached zero. To account for this surprising result, we propose a mechanism in which base-induced removal of the N-H proton of 2 leads to acetyl group migration from oxygen to the neighboring nitrogen, followed by cleavage of the resulting rearrangement product to isopropanediazoate ion and the known HNO precursor, CH(3)-C(O)-NO. The trappable yield of HNO from 2 was significantly enhanced over 1 at physiological pH, in part because the slower rate of hydrolysis for 2 generated a correspondingly lower steady-state concentration of HNO, thus, minimizing self-consumption and enhancing trapping by biological targets such as metmyoglobin and glutathione. Consistent with the chemical trapping efficiency data, micromolar concentrations of prodrug 2 displayed significantly more potent sarcomere shortening effects relative to 1 on ventricular myocytes isolated from wild-type mouse hearts, suggesting that 2 may be a promising lead compound for the development of heart failure therapies.