Probing organic layers on the TiO2(110) surface

In this work, we use first principles simulations to provide features of the dynamic scanning force microscopy imaging of adsorbed organic layers on insulating surfaces. We consider monolayers of formic (HCOOH) and acetic (CH(3)COOH) acid and a mixed layer of acetic and trifluoroacetic acids (CF(3)COOH) on the TiO(2)(110) surface and study their interaction with a silicon dangling bond tip. The results demonstrate that the silicon tip interacts more strongly with the substrate and the COO(-) group than the adsorbed acid headgroups, and, therefore, molecules would appear dark in images. The pattern of contrast and apparent height of molecules is determined by the repulsion between the tip and the molecular headgroups and by significant deformation of the monolayer and individual molecules. The height of the molecule on the surface and the size of the headgroup play a large role in determining access of the tip to the substrate and, hence, the contrast in images. Direct imaging of the molecules themselves could be obtained by providing a functionalized tip with attraction to the molecular headgroups, for example, a positive potential tip.     

New phosphite-oxazoline ligands for efficient Pd-catalyzed substitution reactions

We have designed and synthesized a new family of readily available highly modular phosphite-oxazoline ligands for the Pd-catalyzed asymmetric allylic substitution reactions. The introduction of a pi-acceptor flexible bulky biphenyl phosphite moiety in the ligand design is highly adventitious in the product outcome. Thus, this ligand series affords excellent reaction rates (TOF's up to >2400 mol.(mol.h)-1) and enantioselectivities (ee's up to >99%) and, at the same time, shows a broad scope for different substrate types.     

Application of Task-specific Ionic Liquids for Intensified Separations

Summary. Ionic liquids offer tremendous opportunities to intensify reactions and separations in process technologies by tuning their physical and chemical properties. Several ionic liquids are suitable for the separation of aromatic and aliphatic hydrocarbons. CO₂ absorption behavior was influenced by the functionalized chains appended to the room temperature ionic liquid (RTIL) cation. Ionic liquids seem able to combine the chemical features of amine solutions with the characteristic advantages of the physical solvents used for CO₂ absorption.     

Application of fluorescence reactions in the ring oven segment technique

Summary The ring oven segment technique already described earlier has been applied to the determination of ng- tog-amounts of organic and inorganic substances using fluorescence reactions. The methods proposed here are based either on self-fluorescence or on appearance or disappearance of fluorescence following a chemical reaction.

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Anwendung von Fluoreszenzreaktionen in der Ringofen-Segmenttechnik

Zusammenfassung Die bereits früher beschriebene Ringofen-Segmenttechnik wurde auf die Bestimmung organischer und anorganischer Substanzen im ng- bisg-Bereich mit Hilfe von Fluoreszenzreaktionen angewendet. Die hier vorgeschlagenen Methoden beruhen entweder auf Eigenfluoreszenz oder aber auf der Bildung bzw. dem Verschwinden von Fluoreszenz nach einer chemischen Reaktion.

     

The molecular structure of 2-methylbenzotriazole (2MeBzTr) in connection with the x-ray structure of 2MeBzTr.HBF4.H2O

The fluoroborate of 1H-2-methylbenzotriazolium monohydrate crystallizes in the Pbca space group [Z = 8, a = 16.734(3), b = 19.153(9), c = 6.937(1) Å], The hydrogen bond network between the three molecules, 2MeBzTr, HBF₄ and H₂O, corresponds to a situation intermediate between the fluoroborate of a protonated benzotriazole (BF4^?.2MeBzTrH⁺) and a neutral benzotriazole hydrogen-bonded to fluoroboric acid (HBF₄,2MeBzTr). The behaviour of the title compound in solution is also intermediate between these two extreme situations. Thus, the present compound is one of the rare examples of a proton solvated only by very weak hydrogen bond acceptors.     

Detection of chiral perturbations in ferroelectric liquid crystals induced by an atropisomeric biphenyl dopant

The atropisomeric dopant 2,2',6,6'-tetramethyl-3,3'-dinitro-4,4'-bis[(4-nonyloxybenzoyl)oxy]biphenyl (1) induces a ferroelectric SmC phase when doped into the SmC liquid crystal hosts 2-(4-butyloxyphenyl)-5-octyloxypyrimidine (PhP1) and (+/-)-4-[(4-methylhexyl)oxy]phenyl 4-decyloxybenzoate (PhB). The propensity of dopant 1 to induce a spontaneous polarization (polarization power) is much higher in PhP1 than in PhB (1555 nC/cm(2) vs <35 nC/cm(2)), which is attributed to a greater propensity of 1 to undergo chirality transfer via core-core interactions with PhP1. In previous work, we postulated that a chiral perturbation exerted by 1 in PhP1 amplifies the polarization power of the dopant by causing a chiral distortion of the mean field potential (binding site) constraining the dopant in the SmC host, as described by the Chirality Transfer Feedback (CTF) model. To test the validity of the CTF model, and to provide a more direct assessment of the chiral perturbation exerted by dopant 1 on surrounding host molecules, we measured the effect of 1 on the polarization power of other chiral dopants acting as probes. In one series of experiments, (S,S)-5-(2,3-difluorooctyl)-2-(4-octylphenyl)pyridine (MDW950) and (S)-4-(1-methylheptyloxy)phenyl 4-decyloxybenzoate (4), which mimic the structures of PhP1 and PhB, were used as probes. In another series of experiments, the atropisomeric dopant 2,2',3,3',6,6'-hexamethyl-4,4'-bis[(4-nonyloxybenzoyl)oxy]biphenyl (2) was used as probe in PhP1. The results of the probe experiments suggest that dopant 1 exerts a much stronger chiral perturbation in PhP1 than in PhB. More significantly, the results of experiments using 2 as probe show that the chiral perturbation exerted by 1 can amplify the polarization power of another atropisomeric dopant, thus providing the first experimental evidence of the CTF effect.     

Pseudoesters and derivatives. XXV. 1,3-Dipolar cycloaddition of diazomethane to 5-methoxy-3-pyrrolin-2-ones

Cycloaddition of diazomethane to pyrrolinones 1a,b,d,e affords only one regioisomer as a mixture of the epimeric pyrrolopyrazolines 2 and 2 ′,4-Halo derivatives 1f,g react with diazomethane to give the two possible regioisomers 2 and 3. The regio- and stereochemistry of the adducts is evidenced by the ¹H-nmr data. The primary adducts originated from the halopyrrolinones suffer dehydrohalogenation to give aromatized products, which by further methylation give derivatives of type 7, 8, 10 and 11.     

The solubilization of alcohols in micellar solutions

The specific conductivities of dodecyldimethylbenzylammonium bromide (C12BBr) have been determined in aqueous butanol and aqueous benzyl alcohol solutions in the temperature range of 5-40°C. From these data the temperature dependent critical micelle concentration (cmc) was determined. The molar fraction of alcohol in the micelle was estimated using the theory suggested by Motomura et al. for surfactant binary mixtures. The thermal properties such as standard Gibbs free energy, enthalpy and entropy of solubilization of alcohols in the micelles were estimated for the phase separation model. The change in heat capacity upon solubilization of alcohol in the micelle has been estimated form the above properties. This revised version was published online in July 2006 with corrections to the Cover Date.     

Fourier transform-ion cyclotron resonance study of the gas-phase acidities of germane and methylgermane; Bond dissociation energy of germane

An accurate gas-phase acidity for germane (enthalpy scale, equivalent to the proton affinity of GeH₃ ^?), ΔH _acid ^o(GeH₄) = 1502.0 ± 5.1 kJ mol^?1, is obtained by constructing a consistent acidity ladder between GeH₄, and H₂S by using Fourier transform-ion cyclotron resonance spectrometry, and 0 and 298.15 K values for the first bond dissociation energy of GeH₄ are proposed: D₀ ^o(H₃Ge-H) = 352 ± 9 kJ mol^?1; D ^o(H₃Ge-H) = 358 ± 9 kJ mol^?1, respectively. These results are compared with experimental and theoretical data reported in the literature. Methylgermane was found to be a weaker acid than germane by approximately 35 kJ mol^?1: ΔH _acid ^o = 1536.6 kJ mol^?1.     

Protein-reactive natural products

Researchers in the post-genome era are confronted with the daunting task of assigning structure and function to tens of thousands of encoded proteins. To realize this goal, new technologies are emerging for the analysis of protein function on a global scale, such as activity-based protein profiling (ABPP), which aims to develop active site-directed chemical probes for enzyme analysis in whole proteomes. For the pursuit of such chemical proteomic technologies, it is helpful to derive inspiration from protein-reactive natural products. Natural products use a remarkably diverse set of mechanisms to covalently modify enzymes from distinct mechanistic classes, thus providing a wellspring of chemical concepts that can be exploited for the design of active-site-directed proteomic probes. Herein, we highlight several examples of protein-reactive natural products and illustrate how their mechanisms of action have influenced and continue to shape the progression of chemical proteomic technologies like ABPP.