Stereoselective synthesis of the optically active functionalized 1,3,5-all-anti-triol

The optically active 1,3,5-$\text{all}$-$\text{anti}$-triol $\text{20}$ was synthesized starting from ($\text{S}$)-(-)-malic acid with complete stereoselection, based on the stereoselective reduction of cyclic β-keto acetal and successive transthioacetalization.     

Diastereoselective self-aggregation of synthetic 3-(1-hydroxyethyl)-bacteriopyrochlophyll-a as a novel photosynthetic antenna model absorbing near the infrared regions

3-Deacetyl-3-(1-hydroxyethyl)bacteriopyrochlorophyll-a (1), 7,8-dihydrobacteriochlorophyll-d possessing 8-ethyl, 12-methyl and 17(4)-phytyl groups, was prepared by modifying naturally occurring bacteriochlorophyll-a. The synthetic 3(1)-epimers were separated by high-performance liquid chromotagraphy, and the absolute configuration at the 3(1)-position was determined by derivatization of 1 to a structurally determined chlorin. A dichloromethane solution of 3(1)R-1 or 3(1)S-1 was diluted with a 1000-fold volume of cyclohexane to give self-aggregation species absorbing light at a near-infrared (NIR) region (<910 nm). The resulting Qy maximum in 3(1)R-1 was 860 nm and redshifted by 2170 cm(-1) from the monomeric one, whereas epimeric 3(1)S-1 showed a less redshifted peak at ca 800 nm, with a small dimeric band around 740 nm. Such visible spectra indicated that 3(1)R/S-1 formed different supramolecular structures in the self-aggregates. In contrast, self-aggregation of the 7,8-dehydro-compound 2, bacteriochlorophyll-dP, found in natural antennas of photosynthetic green bacteria showed much smaller diastereomeric control. The self-aggregates of 3(1)R-1 absorbing light in the NIR region would be models of intrinsic membraneous light-harvesting complexes 1 in photosynthetic purple bacteria as well as extramembranous antennas in green bacteria.     

A novel synthesis of bicyclo[3.3.0]oct-1-en-3-ones from cyclobutanones through [chloro(p-tolylsulfinyl)methylidene]cyclobutanes with ring expansion

Treatment of [chloro(p-tolylsulfinyl)methylidene]cyclobutanes, which were synthesized from cyclobutanones and chloromethyl p-tolyl sulfoxide in three steps in high overall yields, with excess cyanomethyllithium gave enaminonitriles in high yields. Heating of these enaminonitriles with H₃PO₄ in acetic acid gave 2-cyanobicyclo[3.3.0]oct-1-en-3-ones in good yield. On the other hand, treatment of the [chloro(p-tolylsulfinyl)methylidene]cyclobutanes with cyanomethyllithium followed by lithium carbanion of the homologues of acetonitrile afforded enaminonitriles having a substituent at the 3-position. Heating of the enaminonitriles with H₃PO₄ in acetic acid gave 2-substituted bicyclo[3.3.0]oct-1-en-3-ones in good to high yields. This method offers a novel and versatile procedure for synthesis of 2-substituted bicyclo[3.3.0]oct-1-en-3-ones from cyclobutanones in good overall yields.     

Determination of absolute structure of macroviracins by chemical synthesis

The relative and absolute configurations of macroviracins have been established by the stereocontrolled synthesis of methyl ester 2a of the C(22) carboxylic acid, a constitutive fatty acid of macroviracin A (1), and their comparison to a sample 2 derived from the natural product 1. [structure: see text]     

Low-barrier hydrogen bond between phosphate and the amide group in phosphopeptide

As the conversion between the monoionic (1) and diionic (2) form of the phosphate occurs, the phosphorylated peptides or proteins can not only cause the formation of a hydrogen bond between the phosphate group and the amide group but also change the strength of the hydrogen bond to form low-barrier hydrogen bonds (LBHBs). This reversible protonation of the phosphate group, which changes both the electrostatic properties of the phosphate group and the strength of the hydrogen bond, provides a possible mechanism in regulating protein function.     

Protective effects of an antioxidant derived from serine and vitamin B6 on skin photoaging in hairless mice

The generation of reactive oxygen species (ROS) by ultraviolet radiation (UVR) accelerates skin aging, which is known as photoaging. Because cutaneous iron catalyzes ROS generation, sequestering iron by chelating agents is thought to be an effective approach toward preventing photoaging. Previously, N-(4-pyridoxylmethylene)-l-serine (PYSer) was designed as an antioxidant to suppress iron-catalyzed ROS generation by its iron-sequestering activity. In this study, PYSer showed protective effects against skin damage in hairless mice irradiated with ultraviolet B (UV-B). Topical application of PYSer to the skin significantly delayed and/or decreased the visible wrinkle formation induced by chronic UV-B irradiation. A histological study indicated that UV-B-induced epidermal hypertrophy and lymphocytic infiltration were suppressed by PYSer. Moreover, PYSer showed suppressive activity against the UV-B-induced increase in glycosaminoglycans (GAG). These results indicate that PYSer is a promising antioxidant for the prevention of chronic skin photoaging by its iron-sequestering activity.     

Protein separation by nonsynchronous coil planet centrifuge with aqueous-aqueous polymer phase systems

Counter-current chromatographic separation of proteins was performed using a rotary-seal-free nonsynchronous coil planet centrifuge (CPC) fabricated in our laboratory. This apparatus has a unique feature that allows a freely adjustable rotational rate of the coiled separation column at a given revolution speed. The separation was performed using a set of stable proteins including cytochrome c, myoglobin and lysozyme with two different types of aqueous-aqueous polymer phase systems, i.e., PEG (polyethylene glycol) 1000-dibasic potassium phosphate, and PEG 8000-dextran T500 in 5 mM potassium phosphate buffer. Using a set of multilayer coiled columns prepared from 0.8 mm I.D. PTFE tubing with different volumes (11, 24, 39 ml), the effect of the column capacity on the partition efficiency was investigated under a given set of experimental conditions. Among these experiments, the best separation of proteins was attained using the 39 ml capacity column with a 12.5% (w/w) PEG 1000-12.5% (w/w) dibasic potassium phosphate system at 10 rpm of coil rotation under 800 rpm. With lower phase mobile at 0.2 ml/min in the head-to-tail elution, the resolution between cytochrome c and myoglobin was 1.6 and that between myoglobin and lysozyme, 1.9. With upper phase mobile in the head-to-tail elution, the resolution between lysozyme and myoglobin peaks was 1.5. In these two separations, the stationary phase retention was 35.0 and 33.3%, respectively. Further studies were carried out using a pair of eccentric coil assemblies with 0.8 mm I.D. PTFE tubing at a total capacity of 20 ml. A comparable resolution was obtained using both lower and upper phases as a mobile phase in a head-to-tail elution. The results of our studies demonstrate that the nonsynchronous CPC is useful for protein separation with aqueous-aqueous polymer phase systems.     

Stereoselective Self‐Aggregation of 31‐Epimerically Pure Amino Analogs of Zinc Bacteriochlorophyll‐d in an Aqueous Micelle Solution

Zinc bacteriochlorophyll‐d analogs possessing an amino group instead of the original hydroxy group at the C3¹ position were prepared by chemical modification of naturally occurring chlorophyll‐a. The synthetic 3¹‐epimers were successfully separated by reverse phase HPLC to give diastereomerically pure samples. The stereochemistry of the chiral C3¹‐center in the separated amines was determined by NMR analysis of their diastereomeric amides as well as by their asymmetric synthesis from authentic stereoisomers. Both the epimers were monomeric in tetrahydrofuran to give sharp electronic absorption bands, while they self‐aggregated to form chlorosomal oligomers with the redshifted bands in an aqueous Triton X‐100 micelle solution (pH = 6.9). The resulting oligomers deaggregated by addition of p‐toluenesulfonic acid to give monomeric N‐protonated ammonium species. The aggregation and deaggregation were dependent on the 3¹‐stereochemistry, indicating that each epimer produced supramolecularly different self‐aggregates.     

In Situ Observation of Thiol Michael Addition to a Reversible Covalent Drug in a Crystalline Sponge

A reversible Michael addition reaction between thiol nucleophiles and cyanoenones has been previously postulated to be the mechanism‐of‐action of a new family of reversible covalent drugs. However, the hypothetical Michael adducts in this mechanism have only been detected by spectroscopic methods in solution. Herein, the crystallographic observation of reversible Michael addition with a potent cyanoenone drug candidate by means of the crystalline‐sponge method is reported. After inclusion of the cyanoenone substrate, the sponge crystal was treated with a thiol solution. Subsequent crystallographic analysis confirmed the single‐crystal‐to‐single‐crystal transformation of the substrate into the impermanent Michael adduct.     

Phototaxis of Oil Droplets Comprising a Caged Fatty Acid Tightly Linked to Internal Convection

We found that novel sub‐millimeter‐sized photoactive oil droplets of oleic acid bearing a photolabile protecting group, 2‐nitrobenzyl oleate (NBO), in basic water exhibited unidirectional motion toward a UV light source. This unidirectional motion can be explained by anisotropic photolysis on a surface of the NBO droplet with low permeability for UV light. Time‐dependent changes of the movement under UV irradiation occurred in a cascade manner (still‐standing, induction, and active stages). The velocity of the UV‐irradiated droplet in the induction stage was small, but it was accelerated sixteen times by the presence of an inner convection structure, which was created by continued photolysis. This characteristic dynamics, which is derived from a supramolecular machinery system towards the external stimulus, may be similar to the phototaxis of a living cell.