Spin-trapping of oxygen free radicals in chemical and biological systems: new traps, radicals and possibilities

The choice of the spin-trap that is to be applied in any EPR study represents the crossroad between a comprehensive investigation and an "ordinary" quantification of production of radicals. So, the scope of our study was to compare the performance of different spin-traps for qualitative analysis of radical-generating systems, and their ability to recognize previously unnoticed radicals. In addition, we present a brief account of the difficulties involved in the detection of oxygen-centered radicals in chemical and biological systems accompanied by the rationale for using the EPR spin-trapping technique in quantitative studies of such reactive species. Certain technical aspects of EPR experiments related to efficient trapping of free radicals in biochemical systems are also discussed. As an example we present here results obtained using EPR spectroscopy and the spin-trap DEPMPO, which show that the Fenton reaction, as well as various biological systems generate a previously unappreciated hydrogen (*H) atom.     

Co(OH)2-combined carbon-nanotube array electrodes for high-performance micro-electrochemical capacitors

We have investigated binder-free Co(OH)₂-combined carbon-nanotube (CNT) array electrodes using anodized aluminum oxide (AAO) templates for micro-electrochemical capacitors. It is shown that compared to the capacitors fabricated with CNT only electrodes (6.3 F/cm³ at 100 mV/s), those with the Co(OH)₂-combined CNT array electrodes produce much higher capacitance (12.74 F/cm³ at 100 mV/s) together with superior high-rate capacitance. The improved electrochemical behavior is explained in terms of high capacitance of amorphous Co(OH)₂ electrode and the use of CNT arrays as effective current collector.     

Mesoporous Titania Thin Film with Highly Ordered and Fully Accessible Vertical Pores and Crystalline Walls

We report the preparation of mesoporous titania thin films with the R m pore structure derived from the Im m self‐assembled ordering of the titania species and an EO₁₀₆PO₇₀EO₁₀₆ triblock copolymer. The films were spin‐cast and then aged at 18 °C at a relative humidity of 70 %, which led to the orientation of the Im m structure with the [111] direction perpendicular to the substrates. The [111] body‐diagonal channels became vertical channels upon calcination at 400 °C, thus leading to thin films with vertical channels. The pores are ordered over a large area of up to 1 μm². The titania films can be formed on various types of substrates. By using a titania film formed on a Pt‐coated Si wafer as a template, we produced by an electrochemical‐deposition technique arrays of gold nanowires, whose morphology suggests that most of the pores of the titania thin films are accessible. The pore structure of vertical channels is stable up to 600 °C, at which temperature the wall materials crystallize into anatase.     

A Mesoporous Silica Thin Film as Uptake Host for Guest Molecules with Retarded Release Kinetics

Uptake and release processes of various fluorescent rhodamine dyes and antitumor drugs to/from an ordered mesoporous silica film are investigated by means of UV/Vis absorption and fluorescence spectroscopies. The pores in the 160 nm‐thick silica film strongly withdraw the dyes from water, thus allowing the storage of several micrograms of guest molecules per square centimeter of film. The binding equilibrium of the dyes follows a Langmuir‐type adsorption. The dissociation constant, K_d, and the maximum binding amount to the film, , are determined by fitting the binding curves. The release kinetics of the guests from the film to a simulated body fluid (SBF) solution follows a bimodal first‐order exponential behavior. The release kinetics from the mesoporous thin film is remarkably retarded relative to that from mesoporous powders. Among all the studied dyes, rhodamine 101 is released most slowly, which implies that the release rate depends not only on the interactions between the guests and the silica surface, but also on intermolecular interactions between the guest molecules. Comparison of the release kinetics of different antitumor drugs, such as actinomycin D and mitoxantrone, into an SBF solution shows that mitoxantrone is released much slowly. This slower release is attributed to the positive molecular charge and the formation of dimers in the pores.     

An impulsive, electropulsation-driven backflow in microchannels during electroporation

We describe for the first time an impulsive, electropulsation-driven backflow in microchannels for on-chip cell electroporation.     

Efficiency of bulky protic solvent for SN2 reaction

We calculate and compare the effects of aprotic vs protic solvent on the rate of SN2 reaction [F- + C3H7OMs--> C3H7F + OMs-]. We find that aprotic solvent acetonitrile is more efficient than a small protic solvent such as methanol. Bulky protic solvent (tert-butyl alcohol) is predicted to be quite efficient, giving the rate constant that is similar to that in CH3CN. Our calculated relative activation barriers of the SN2 reaction in methanol, tert-butyl alcohol, and CH3CN are in good agreement with experimental observations.     

Regioselectivity prediction of CYP1A2-mediated phase I metabolism

A kinetic, reactivity-binding model has been proposed to predict the regioselectivity of substrates meditated by the CYP1A2 enzyme, which is responsible for the metabolism of planar-conjugated compounds such as caffeine. This model consists of a docking simulation for binding energy and a semiempirical molecular orbital calculation for activation energy. Possible binding modes of CYP1A2 substrates were first examined using automated docking based on the crystal structure of CYP1A2, and binding energy was calculated. Then, activation energies for CYP1A2-mediated metabolism reactions were calculated using the semiempirical molecular orbital calculation, AM1. Finally, the metabolic probability obtained from two energy terms, binding and activation energies, was used for predicting the most probable metabolic site. This model predicted 8 out of 12 substrates accurately as the primary preferred site among all possible metabolic sites, and the other four substrates were predicted into the secondary preferred site. This method can be applied for qualitative prediction of drug metabolism mediated by CYP1A2 and other CYP450 family enzymes, helping to develop drugs efficiently.     

Efficient Delivery of Globotriaosylceramide Synthase siRNA using Polyhistidine-Incorporated Lipid Nanoparticles

In this study, a novel polyhistidine-incorporated lipid nanoparticle (pHis/LNP) is developed for the delivery of therapeutic globotriaosylceramide (Gb3) synthase siRNAs using a microfluidic device with pHis as a biocompatible method of endosome escape. To inhibit the expression of Gb3 synthase, six siRNAs against Gb3 synthase are designed and an optimal siRNA sequence is selected. Selected Gb3 synthase siRNA is incorporated into pHis/LNP to prepare a spherical siRNA pHis/LNP with a size of 62.5 ± 1.9 nm and surface charge of −13.3 ± 4.2 mV. The pHis/LNP successfully protects siRNAs from degradation in 50% serum condition for 72 h. Prepared pHis/LNP exhibits superior stability for 20 days and excellent biocompatibility for A549 cells. After treatment with fluorescence-labeled LNPs, dotted fluorescent signals are co-localized with Lysotracker in cells with LNPs, whereas strong and diffused fluorescence intensity is observed in cells with pHis/LNPs probably due to successful endosomal escape. The extent of Gb3 synthase gene silencing by siRNA pHis/LNP is greatly improved (6.0-fold) compared to that by siRNA/LNP. Taken together, considering that the fabricated siRNA pHis/LNP exhibits excellent biocompatibility and superior gene silencing activity over conventional LNP, these particles can be utilized for the delivery of a wide range of therapeutic siRNAs.