Combinatorial diversity of fission yeast SCF ubiquitin ligases by homo- and heterooligomeric assemblies of the F-box proteins Pop1p and Pop2p

Background  

SCF ubiquitin ligases share the core subunits cullin 1, SKP1, and HRT1/RBX1/ROC1, which associate with different F-box proteins. F-box proteins bind substrates following their phosphorylation upon stimulation of various signaling pathways. Ubiquitin-mediated destruction of the fission yeast cyclin-dependent kinase inhibitor Rum1p depends on two heterooligomerizing F-box proteins, Pop1p and Pop2p. Both proteins interact with the cullin Pcu1p when overexpressed, but it is unknown whether this reflects their co-assembly into bona fide SCF complexes.     

Isonitrile complexes derived from the nucleophilic attack of primary amines on the dithiomethyl ester complex,RuI(CO)(PPh3)2 (CS2Me)

The bidentate dithiomethyl ester complex, RuI(CO)(PPh₃)₂ (CS₂Me) reacts with primary amines affording a series of novel dimeric isonitrile complexes, [RuI(CO)(CNR)(PPh₃)₂SH]₂.     

Polyimides containing oxyethylene units

Four aromatic dinitro compounds containing oxyethylene units 1,2-bis(4-nitrophenoxy)ethane, bis(2)-(4-nitrophenoxy)ethyl ether, 1,2-bis(2)-(4-nitrophenoxy)ethoxy)ethane, and bis(2-(2-(4-nitrophenoxy)ethoxy)ethyl) ether were prepared by an aromatic nucleophilic substitution reaction that involved 1-fluoro-4-nitrobenzene and the appropriate oxyethylene glycol. Each of the dinitro compounds could be reduced chemically or catalytically to produce the diamines 1,2-bis(4-aminophenoxy)ethane, bis(2-(4-amino-phenoxy)ethyl ether, 1,2-bis(2-(4-aminophenoxy)ethoxy)ethane, and bis(2-(2-(4-aminophenoxy)ethoxy)ethyl) ether. Polymerization of the diamines was carried out in m-cresol with toluene as an azeotroping agent. Polymides derived from 5,5′-[2,2,2-trifluoro-1-(trifluoromethyl)ethylidene]bis-1,3-isobenzofuradione exhibited good solubility in chlorinated solvents, glass transition temperatures as low as 140°C, as evidenced by viscous flow, and good thermal stability; a 5% weight loss generally occured at greater than 450°C. Isothermal aging studies conducted at 600°F(315°C) for 200 h indicated that weight loss is directly related to oxyalkylene chain length–10% for the shortest and 50% for the longest chain.     

Electrophoretic purification of the alpha and beta subunits of phosphorylase kinase and evidence in support of the deduced amino acid sequences

A simple, rapid sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) method is presented for isolating the alpha, alpha' and beta subunits of rabbit muscle phosphorylase kinase. The SDS-PAGE procedure can yield milligram amounts of alpha and beta from a single preparative gel and also allows isolation of the alpha' isozyme free of alpha. Notably the method provides the purified subunits in a form amenable to structural analysis. Edman degradation of alpha and alpha' reveal identical NH2-terminal structures. Amino acid analysis of the electrophoretically purified alpha and beta subunits are in good agreement with their deduced primary structures. The amino acid sequence of 488 residues in alpha and 713 residues in beta were determined by gas phase Edman degradation. The data support the recently deduced primary structures of alpha (Zander et al., Proc. Natl. Acad. Sci. USA, 1988, 85, 9381-9385).     

Synthesis and Characterization of the Isocyanide Ligated Centered Zirconium Halide Cluster [(Zr6Be)Cl12(CNXyl)6]

The first isocyanide ligated hexanuclear zirconium halide cluster is reported. The unoxidized [(Zr₆Be)Cl₁₂(CNXyl)₆] (CNXyl = 2,6-dimethylphenyl isocyanide) was obtained from the solid state precursor K₃Zr₆Cl₁₅Be by dissolution in CH₃CN in the presence of CNXyl. The CNXyl ligands occupy all the axial positions on the cluster. The compound was recrystallized from CH₂Cl₂ and Et₂O. [(Zr₆Be)Cl₁₂(CNXyl)₆].2CH₂Cl₂ crystallizes in the space group (#2) with a = 12.092(5) Å, b=12.728(5) Å, c = 14.102(8) Å, = 104.98(4)°, =107.11°, = 100.94°, V = 1919(2) ų, Z = l, R = 11.3% and R _W = 27.0%. For the bound isocyanide ligands, v _CN increases to 2140 cm^–1.     

Determination of enzyme kinetic parameters of cyclic CMP-specific phosphodiesterase by quantitative fast atom bombardment tandem mass spectrometry

The determination of cytidine 3′,5′-cyclic monophosphate-specific phosphodiesterase activity by means of fast-atom bombardment (FAB) mass Spectrometry with mass-analysed ion kinetic energy (MIKE) spectrum scanning is described. Initial efforts to determine the activity of the enzyme by this method were unsuccessful owing to the obfuscation of sample-related peaks by peaks emanating from the incubation buffer and cation adducts; dilution of buffer and a desalting procedure overcame these difficulties. In the resulting positive-ion FAB mass spectra, characteristic peaks of the enzyme substrate and product could be readily identified and the protonated molecular ions selected for MIKE scanning. By spiking enzyme incubates with known amounts of substrate and product, and measuring peak heights in the MIKE spectra of both spiked and unspiked samples, the substrate/product ratio at the end of a series of phosphodiesterase incubations was determined. From the data obtained, the K_m and V_max of the phosphodiesterase were calculated as 6.08 mM and 11 μmol min^?1 mg^?1, respectively, showing good agreement with the analogous values of 8.06 mM and 5.8 μmol^?1 min^?1 mg^?1 obtained by radioactive assay.     

Ammonium cyanate shows N-H...N hydrogen bonding, not N-H...O

The transformation of ammonium cyanate into urea, first studied over 170 years ago by W?hler and Liebig, has an important place in the history of chemistry. To understand the nature of this solid state reaction, knowledge of the crystal structure of ammonium cyanate is a prerequisite. Employing neutron powder diffraction, we demonstrate conclusively that, in the structure of ammonium cyanate, the NH(4)(+) cation forms N-H...N hydrogen bonds to four cyanate N atoms at alternate corners of a distorted cube, rather than our previously proposed alternative arrangement with N-H...O hydrogen bonds to cyanate O atoms at the other four corners.     

A simple sum rule in raman theory

It is shown that in the limit of large detuning energy and in the absence of coordinate dependence of the transition moment, the resonance Raman amplitude for a 0 → n transition on a harmonic potential surface is proportional to (δ²_? + δ²₊)^?1 × ?^∞_?∞ exp (?q²) · [?ⁿΔV(q)/?q¹¹] dq< where ΔV(q) is the difference between the arbitrary excited-state surface and the initial harmonic potential. The resonant and non-resonant detuning energies are given by δ_? = E ? hv and δ₊ = E + hv, where v is the incident laser frequency and E is the minimum separation between the potential surfaces.     

Synthesis of proline-modified analogues of the neuroprotective agent glycyl-l-prolyl-glutamic acid (GPE)

The synthesis of ten proline-modified analogues of the neuroprotective tripeptide GPE is described. Five of the analogues incorporate a proline residue with a hydrophobic group at C-2 and two further analogues have this side chain locked into a spirolactam ring system. The pyrrolidine ring was also modified by replacing the γ-CH₂ group with sulfur and/or incorporation of two methyl groups at C-5.