Synthesis and antibacterial activity of 7-ethyl-3-methyl-4,7-dihydro-4-oxoisothiazolo[5,4-b]pyridine-5-carboxylic acid

The synthesis of the quinolone, 7-ethyl-3-methyl-4,7-dihydro-4-oxoisothiazolo[5,4-b]pyridine-5-carboxylic acid 4 was accomplished utilizing the Gould-Jacobs dependent route. The compound had very weak in vitro activity as compared to nalidixic acid versus E. coli, P. aeruginosa, K. pnuemoniae, S. aureus and P. mirabilis.     

Investigative proteomics: identification of an unknown plant virus from infected plants using mass spectrometry

We describe the identification of a previously uncharacterized plant virus that is capable of infecting Nicotiana spp. and Arabidopsis thaliana. Protein extracts were first prepared from leaf tissue of uninfected tobacco plants, and the proteins were visualized with two-dimensional electrophoresis (2-DE). Matching gels were then run using protein extracts of a tobacco plant infected with tobacco mosaic virus (TMV). After visual comparison, the proteins spots that were differentially expressed in infected plant tissues were cut from the gels and analyzed by high performance liquid chromatography-tandem mass spectrometry (HPLC-MS/MS). Tandem mass spectrometry data of individual peptides was searched with SEQUEST. Using this approach we demonstrated a successful proof-of-concept experiment by identifying TMV proteins present in the total protein extract. The same procedure was then applied to tobacco plants infected with a laboratory viral isolate of unknown identity. Several of the differentially expressed protein spots were identified as proteins of potato virus X (PVX), thus successfully identifying the causative agent of the uncharacterized viral infection. We believe this demonstrates that HPLC-MS/MS can be used to successfully characterize unknown viruses in infected plants.     

Cation and pressure effects on the electrochemistry of 12-tungstocobaltate and 12-tungstophosphate ions in acidic aqueous solution

The effects of supporting electrolytes and of pressure on the electrode reactions of the aqueous CoW(12)O(40)(5-/6-) couple at 25 degrees C are reported, together with limited data on PW(12)O(40)(3-)/4-) and PW(12)O(40)(4-/5-). The half-wave potentials E(1/2) for the CoW(12) couple become moderately more positive with increasing electrolyte concentration and cationic charge, and also in the sequences Li(+) approximately Na(+) < NH(4)(+) < or = H(+) < K(+) < Rb(+) < Cs(+) and Na(+) < Mg(2+) < Ca(2+) < Eu(3+). The mean diffusion coefficients for CoW(12) with the 1:1 electrolytes are independent of electrolyte concentration and rise only slightly from Li(+) to Cs(+), averaging (2.4 +/- 0.3) x 10(-6) cm(2) s(-1). Neither the volumes of activation for diffusion Delta V(diff)(++) (average -0.9 +/- 1.1 cm(3) mol(-1)) nor the electrochemical cell reaction volumes Delta V(Ag/AgCl) (average -22 +/- 2 cm(3) mol(-1)) for the CoW(12) couple show significant dependence on electrolyte identity or concentration. For the PW(12)(3-/4-) and PW(12)(4-/5-) couples, Delta V(Ag/AgCl) = -14 and -26 cm(3) mol(-1), respectively, suggesting a dependence on Delta(z(2)) (z = ionic charge number) as predicted by the Born-Drude-Nernst theory of electrostriction of solvent, but comparison with Delta V(Ag/AgCl) for CoW(12) and other anion-anion couples shows that the Born-Drude-Nernst approach fails in this context. For aqueous electrode reactions of CoW(12), as for other anionic couples such as cyanometalates, the standard rate constants k(el) show specific cation catalysis (Na(+) < K(+) < Rb(+) < Cs(+)), and Delta V(el++) is invariably positive, in the presence of supporting electrolytes. For the heavier group 1 cations, Delta V(el++) is particularly large (10-15 cm(3) mol(-1)), consistent with a partial dehydration of the cation to facilitate catalysis of the electron-transfer process. The positive values of Delta V(el++) for the CoW(12) couple cannot be attributed to rate control by solvent dynamics, which would lead to Delta V(el++) < or = Delta V(diff++), i.e., to negative or zero Delta V(el++) values. These results stand in sharp contrast to those for aqueous cationic couples, for which k(el) shows relatively little influence of the nature of the counterion and Delta V(el++) is always negative.     

Determination of crude protein in animal feed, forage, grain, and oilseeds by using block digestion with a copper catalyst and steam distillation into boric acid: collaborative study

A collaborative study was conducted to evaluate the repeatability and reproducibility of an extension of AOAC Official Method 991.20, Nitrogen (Crude) in Milk, to animal feed, forage (plant tissue), grain, and oilseed materials. Test portions are digested in an aluminum block at 420 degrees C in sulfuric acid with potassium sulfate and a copper catalyst. Digests are cooled and diluted, and concentrated sodium hydroxide is added to neutralize the acid and make the digest basic; the liberated ammonia is distilled by using steam distillation. The liberated ammonia is trapped in a weak boric acid solution and titrated with a stronger standardized acid, hydrochloric acid; colorimetric endpoint detection is used. Fourteen blind samples were sent to 13 collaborators in the United States, Denmark, Sweden, Germany, and the United Kingdom. Recoveries of nitrogen from lysine, tryptophan, and acetanilide were 86.8, 98.8, and 100.1%, respectively. The within-laboratory relative standard deviation (RSDr, repeatability) ranged from 0.40 to 2.38% for crude protein. The among-laboratories (including within-) relative standard deviation (RSD(R), reproducibility) ranged from 0.44 to 2.38%. It is recommended that the method be adopted First Action by AOAC INTERNATIONAL. A lower concentration (1% H3BO3) of trapping solution was compared with the concentration specified in the original protocol (4% H3BO3) and was found comparable for use in an automatic titration system in which titration begins automatically as soon as distillation starts. The Study Directors recommend that 1% H3BO3 as an optional alternative to 4% boric acid trapping solution be allowed for automatic titrators that titrate throughout the distillation.     

NEW PHTHALOCYANINE PHOTOSENSITIZERS FOR PHOTODYNAMIC THERAPY

Six new aluminum and silicon phthalocyanines have been synthesized and their photocytotoxicity toward V79 cells has been studied. The compounds that have been prepared are: AIPcOSi(CH₃)₂(CH₂),N(CH₃)₂, I; AIPcOSi(CH₃)₂(CH₂)₃N(CH₃)₃⁺I^?, II; CH₃SiPcOSi(CH₃)₂(CH₂)₃N(CH₃)₂, III; HOSiPcOSi(CH₃)₂(CH₂)₃N(CH₃)₂, IV; HOSiPcOSi(CH₃)₂(CH₂)₃)₃(CH₃)₃⁺I^?, V; and SiPc[OSi(CH₃)₂(CH₂)₃N(CH₃)₃⁺I^?]₂, VI. Relative growth delay values for compounds I-VI and relative cytotoxicity values for compounds I, II, IV, V and VI have been determined. Compounds I and II have been shown to be comparable in photocytotoxicity to what is presumed to be AIPcOH.xH₂O, and compound IV has been shown to have greater activity. The classes of compounds to which these six compounds belong appear to have potential for photodynamic therapy.     

The peripheral benzodiazepine receptor in photodynamic therapy with the phthalocyanine photosensitizer Pc 4

The peripheral benzodiazepine receptor (PBR) is an 18 kDa protein of the outer mitochondrial membrane that interacts with the voltage-dependent anion channel and may participate in formation of the permeability transition pore. The physiological role of PBR is reflected in the high-affinity binding of endogenous ligands that are metabolites of both cholesterol and heme. Certain porphyrin precursors of heme can be photosensitizers for photodynamic therapy (PDT), which depends on visible light activation of porphyrin-related macrocycles. Because the apparent binding affinity of a series of porphyrin analogs for PBR paralleled their ability to photoinactivate cells, PBR has been proposed as the molecular target for porphyrin-derived photocytotoxicity. The phthalocyanine (Pc) photosensitizer Pc 4 accumulates in mitochondria and structurally resembles porphyrins. Therefore, we tested the relevance of PBR binding on Pc 4-PDT. Binding affinity was measured by competition with 3H-PK11195, a high-affinity ligand of PBR, for binding to rat kidney mitochondria (RKM) or intact Chinese hamster ovary (CHO) cells. To assess the binding of the Pc directly, we synthesized 14C-labeled Pc 4 and found that whereas Pc 4 was a competitive inhibitor of 3H-PK11195 binding to the PBR, PK11195 did not inhibit the binding of 14C-Pc 4 to RKM. Further, 14C-Pc 4 binding to RKM showed no evidence of saturation up to 10 microM. Finally, when Pc 4-loaded CHO cells were exposed to activating red light, apoptosis was induced; Pc 4-PDT was less effective in causing apoptosis in a companion cell line overexpressing the antiapoptotic protein Bcl-2. For both cell lines, PK11195 inhibited PDT-induced apoptosis; however, the inhibition was transient and did not extend to overall cell death, as determined by clonogenic assay. The results demonstrate (1) the presence of low-affinity binding sites for Pc 4 on PBR; (2) the presence of multiple binding sites for Pc 4 in RKM and CHO cells other than those that influence PK11195 binding; and (3) the ability of high supersaturating levels of PK11195 to transiently inhibit apoptosis initiated by Pc 4-PDT, with less influence on overall cell killing. We conclude that the binding of Pc 4 to PBR is less relevant to the photocytotoxicity of Pc 4-PDT than are other mitochondrial events, such as photodamage to Bcl-2 and that the observed inhibition of Pc 4-PDT-induced apoptosis by PK11195 likely occurs through a mechanism independent of PBR.     

Enzymatic oxidation of tert-butylcatechol in the presence of sulfhydryl compounds: Application to the amperometric detection of penicillamine

The high sensitivity that can be attained using an enzymatic system and mediated by 4-tert-butylcatechol (4-TBC) has been verified by on-line interfacing of a rotating biosensor and continuous flow/stopped-flow/continuous-flow processing. Horseradish peroxidase, HRP, [EC 1.11.1.7], immobilized on a rotating disk, in presence of hydrogen peroxide catalyzed the oxidation of 4-TBC, whose back electrochemical reduction was detected on glassy carbon electrode surface at −150 mV. Thus, when penicillamine (PA) was added to the solution, these thiol-containing compounds participate in Michael type addition reactions with 4-TBC to form the corresponding thioquinone derivatives, decreasing the peak current obtained proportionally to the increase of its concentration. The highest response for PA was obtained around pH 7. This method could be used to determine PA concentration in the range 0.02-80 μM (r = 0.998). The determination of PA was possible with a limit of detection of 7 nM, in the processing of as many as 50 samples per hour. The HRP-rotating biosensor was successfully applied to the determination of PA in pharmaceutical formulations.     

Chromium(III) Hydroxide Solubility in the Aqueous K+-H+-OH?-CO2-HCO 3? -CO 32? -H2O System: A?Thermodynamic Model

Chromium(III)-carbonate reactions are expected to be important in managing high-level radioactive wastes. Extensive studies on the solubility of amorphous Cr(III) hydroxide solid in a wide range of pH (3–13) at two different fixed partial pressures of CO₂(g) (0.003 or 0.03 atm.), and as functions of K₂CO₃ concentrations (0.01 to 5.8 mol⋅kg⁻¹) in the presence of 0.01 mol⋅dm⁻³ KOH and KHCO₃ concentrations (0.001 to 0.826 mol⋅kg⁻¹) at room temperature (22±2 °C) were carried out to obtain reliable thermodynamic data for important Cr(III)-carbonate reactions. A combination of techniques (XRD, XANES, EXAFS, UV-Vis-NIR spectroscopy, thermodynamic analyses of solubility data, and quantum mechanical calculations) was used to characterize the solid and aqueous species. The Pitzer ion-interaction approach was used to interpret the solubility data. Only two aqueous species [Cr(OH)(CO₃)₂²⁻ and Cr(OH)₄CO₃³⁻] are required to explain Cr(III)-carbonate reactions in a wide range of pH, CO₂(g) partial pressures, and bicarbonate and carbonate concentrations. Calculations based on density functional theory support the existence of these species. The log ₁₀ K° values of reactions involving these species [{Cr(OH)₃(am) + 2CO₂(g)⇌Cr(OH)(CO₃)₂²⁻+2H⁺} and {Cr(OH)₃(am) + OH⁻+CO₃²⁻ ⇌Cr(OH)₄CO₃³⁻}] were found to be −(19.07±0.41) and −(4.19±0.19), respectively. No other data on any Cr(III)-carbonato complexes are available for comparisons.     

The effect of the counterion on water mobility in reverse micelles studied by molecular dynamics simulations

In this study, mobility and structure of water molecules in Aerosol OT (bis(2-ethylhexyl) sulfosuccinate, AOT) reverse micelles with water content w0 = 5 and Na+, K+, Cs+ counterions have been explored with molecular dynamics (MD) simulations. Using the Faeder/Ladanyi model (J. Phys. Chem. B, 2000, 104, 1033) of the reverse micelle interior, MD simulations were performed to calculate the self-intermediate scattering function, FS(Q,t), for water hydrogen atoms that could be measured in a quasielastic neutron scattering experiment. Separate intermediate scattering functions FRS(Q,t) and FCMS(Q,t) were determined for rotational and translational motion. We find that the decay of FCMS(Q,t) is nonexponential and our analysis of the MD data indicates that this behavior arises from decreased water mobility for molecules close to the interface and from confinement-induced restrictions on the range of translational displacements. Rotational relaxation also exhibits nonexponential decay, which is consistent with relatively rapid restricted rotation and slower rotational relaxation over the full angular range. Rotational relaxation is anisotropic, with the O-H bond short-time rotational mobility considerably higher than that of the molecular dipole. This behavior is related to the decreased density of water-water hydrogen bonds in the vicinity of the interface compared to core or bulk water. We find that the interfacial mobility of water molecules is quite different for the three counterion types, but that the core mobility exhibits weak counterion dependence. Differences in interfacial mobility are strongly correlated with structural features, especially ion-water coordination, and the extent of disruption by the counterions of the water hydrogen bond network.     

Spectroscopic studies of water-soluble sulfonated calix[6]arene

Fluorescence and absorption studies of water-soluble sulfonated calix[6]arene (SCX6) are reported. Water-soluble calixarenes are potentially useful as host molecules for luminophores, and studies of their spectroscopic characteristics are therefore crucial. The absorption and fluorescence spectra of these molecules in aqueous solution were collected, analyzed, and compared with 4-hydroxybenzene sulfonate at different pHs. A red shift in the absorption spectrum and a change in the fluorescence spectrum of the calixarenes are observed upon an increase in pH from 2.0 to 13.0. Some of these spectroscopic changes are attributed to intramolecular hydrogen bonding between adjacent hydroxyl groups of SCX6 after proton disassociation. The formation of excimers between phenolic groups in the calixarene molecule is proposed. In addition, inner-filter effects of SCX6 are discussed. These inner-filter effects prove to be a disadvantage for the use of SCX6 as a host molecule for complexation studies by use of fluorescence probes whose absorption spectra overlap with those of calixarenes.