Proteinases immobilized on poly(vinyl alcohol) cryogel: novel biocatalysts for peptide synthesis in organic media

Covalent immobilization of subtilisin and thermolysin on cryogel of poly(vinyl alcohol) was carried out. The biocatalysts obtained are characterized by high stability in water and in DMF—MeCN mixtures of various compositions. The synthetic efficiency of immobilized subtilisin in the multiple iterative synthesis of the peptide Z—Ala—Ala—Leu—Phe—pNA was examined in organic mixtures of different solvent compositions. Immobilized subtilisin exhibits high synthetic activity in organic media. A series of N-acylated p-nitroanilides of tetrapeptides of the general formula Z—Ala—Ala—Xaa—Yaa—pNA (Z is benzyloxycarbonyl, Xaa = Leu, Lys, or Glu; Yaa = Phe or Asp; pNA = 4-NO₂—C₆H₄NH-) were synthesized in 70—98% yields using immobilized subtilisin as a biocatalyst without activation and protection of the ionogenic groups of polyfunctional amino acids. Immobilized thermolysin in a DMF—MeCN mixture catalyzed the formation of the peptide Z—Ala—Ala—Leu—pNA, which was obtained in 90% yield (during 1 h). It was demonstrated that the biocatalyst can be used repeatedly and that it retained activity after storage in an aqueous buffer during 6 months.     

Portrait of a Family of Highly Stabilizing and Selective Guanine Quadruplex Platinum(II)-Based Binders

The long-standing history of platinum coordination complexes in nucleic acid recognition attests to the unique suitability of such species for therapeutic applications. Here, we report the synthetic exploration and development of a family of di-imine ligands, and their platinum(II) complexes, elaborated on a 3-(2-pyridyl)-[1,2,4]triazolo[4,3-a]pyridine platform which, in its unsubstituted form, has recently been shown to display exceptional capabilities for guanine quadruplex (G4) targeting. The identification of facile, high-yielding synthetic methods for the derivatization of this platform for the incorporation of additional sites of interactions with guanine quadruplex loops and grooves, along with the optimization of platinum(II) complexation methods, are discussed. Gratifyingly, preliminary biophysical screening of this novel family of binders validates all but one family members as robust G4 binders and highlights enhanced selectivity for quadruplex versus duplex DNA compared to the parent compound. These results bear promise for practical developments based on this platform.     

HPLC‐DAD for the determination of three different classes of antifungals: method characterization,statistical approach,and application to a permeation study

This study describes and characterizes methods for high‐performance liquid chromatography diode array detection (HPLC‐DAD) analysis of formulations containing molecules with antifungal activity of three different classes: terbinafine and butenafine (allylamines), miconazole and fluconazole (azoles), and geraniol, neral and geranial (monoterpenes). All methods used the same chromatographic column (RP₁₈), enabling the analysis to be performed in a single batch. The specificity was extensively discussed through the establishment of purity peak methods. The analytical parameters (linearity, precision and accuracy) were calculated and discussed in detail using specific statistical approaches. All substances showed satisfactory results for chromatographic and analytical parameters. Limits of 1.3% to mean repeatability and 2.0% for intermediate precision are suggested as acceptance criteria in validation of methods by HPLC‐DAD, in situations where there is no extensive pretreatment of the samples. The methods proved to be robust and significant factors were discussed regarding their influence on chromatographic parameters (retention time, resolution, tailing factor and column efficiency). Finally, the application of the developed methods was demonstrated by the results of a permeation study of the antifungal agents through bovine hoof membranes. Copyright © 2014 John Wiley & Sons, Ltd.     

New Potential Biocatalysts by Laccase Immobilization in PVA Cryogel Type Carrier

Laccases are enzymes belonging to the Oxidoreductases class. These enzymes may be good biocatalysts for different processes, at laboratory and industrial levels. A successful use at industrial scale demands a higher stability of the enzyme. As an easy way to obtain longer life biocatalysts, the immobilization process is recommended. Thus, the paper presents different ways of obtaining new biocatalysts by a laccase covalent immobilization on a macroporous carrier based on poly(vinyl alcohol) cryogel. Different procedures of covalent immobilization are described, the newly obtained biocatalysts being characterized. According to the experimental data, the stability of the immobilized enzyme increased and the pH profile changed, compared with those of the free enzyme.     

The ideal structure of some analytic crossed products

We study the ideal structure of a class of some analytic crossed products. For an -discrete, principal, minimal groupoid , we consider the analytic crossed product , where is given by a cocycle . We show that the maximal ideal space of depends on the asymptotic range of , ; that is, is homeomorphic to for finite, and consists of the unique maximal ideal for . We also prove that is semisimple in both cases, and that is invariant under isometric isomorphism.

     

Preparation and properties of insoluble forms of bacteriophage T4 lysozyme and chicken egg white lysozyme

Bacteriophage T4 lysozyme and chicken egg white lysozyme were covalently bound to cyanogen bromide activated Sepharose and to glutaraldehyde activated polyacrylhydrazido-Sepharose. The latter method seemed less favorable for T4 lysozyme, since the poly-acrylhydrazido-agarose conjugate exhibited low activity compared to the agarose conjugate. Whole bacteria (M.luteus and chloroform-treatedE. coli B cells) and the soluble uncross-linked peptidoglycan polymer fromM. luteus were used as substrates. Both types of conjugates exhibited low specific activity (lytic activity) toward insoluble substrates (cells), but surprisingly high specific activity toward the soluble substrate (hydrolytic activity). Product analysis showed that the enzyme conjugates retained their specificity of action, i.e., the same products were formed, and their rates of production were the same as those observed with the soluble (native) enzyme. The cell wall disaccharide-tetrapeptide GlcNAc-MurNAc-L-ala-D-gIu-(A₂pm-D-Ala) (C₆) inhibits the hydrolytic activity of both the native and the agarose bound T4 lysozyme. Only a slightly increased thermal stability was observed upon immobilization of T4 lysozyme, whereas the stability of the enzyme during storage and handling was greatly improved. The pH optimum of the lytic activity of Sepharose-T4 lysozyme was shifted about 1 pH unit to the alkaline side, compared to that found for the soluble enzyme, whereas no pH shift was observed for the polyacrylhydrazido-Sepharose conjugate. The optimum of the hydrolytic activity of Sepharose-T4 lysozyme was shifted to the acidic side. The pH optima of the lytic activity of the various lysozymes toward the bacterial cells were all very similar (>7), and differed greatly from the pH optima (<6) observed for their hydrolytic activities toward the negatively charged soluble peptidoglycan polymer. It is proposed that the observed differences in pH optima primarily reflect the basically different properties measured, i.e., the β(1–4) cleaving activity (hydrolytic activity), and dissolution process of the damaged cells (lytic activity).     

Reactions of 4-Aryl-1,2,4-triazolidine-3,5-dithione with Some Electrophilic Reagents

Reaction of 4-aryl-1,2,4-triazolidine-3,5-dithiones in an alkaline medium with chloroacetic acid and its derivatives, as well as with -bromo ketones, results in their conversion to 4-aryl-1,2,4-triazole-3,5-bis(sulfides). The aminomethylation in a neutral medium leads to the formation of 1-(aminomethyl)-4-aryl-1,2,4-triazolidine-3,5-dithiones.     

Hamilton Spaces of Order k ≥ 1

A suitable dual for the k-acceleration bundle(T ^k M, ^k ,M) is the fiberedbundle (T ^k–1 M× _M T*M). The mentioned bundle carries a canonicalpresymplectic structure and k canonical Poisson structures. By means of thisdual we define the notion of Hamilton spaces of orderk, whose total spaceconsists of points x of the configuration spaceM, accelerations of order 1,...,k – 1, y ⁽¹⁾,...,y ^(k–1), and momenta p. Some remarkable Hamiltonian systemsare pointed out. There exists a Legendre mapping from the Lagrange spaces oforder k to the Hamilton space of order k.     

Push-pull optical pumping of pure superposition states

A new optical pumping method, "push-pull pumping," can produce very nearly pure, coherent superposition states between the initial and the final sublevels of the important field-independent 0-0 clock resonance of alkali-metal atoms. The key requirement for push-pull pumping is the use of D1 resonant light which alternates between left and right circular polarization at the Bohr frequency of the state. The new pumping method works for a wide range of conditions, including atomic beams with almost no collisions, and atoms in buffer gases with pressures of many atmospheres.     

Multiple-time scale accelerated molecular dynamics: addressing the small-barrier problem

We present a method for accelerated molecular-dynamics simulation in systems with rare-event dynamics that span a wide range of time scales. Using a variant of hyperdynamics, we detect, on the fly, groups of recurrent states connected by small energy barriers and we modify the potential-energy surface locally to consolidate them into large, coarse states. In this way, fast motion between recurrent states is treated within an equilibrium formalism and dynamics can be simulated over the longer time scale of the slow events. We apply the method to simulate cluster diffusion and the initial growth of Co on Cu(001),where time scales spanning more than 6 orders of magnitude are present, and show that the method correctly follows the slow events, so that much larger times can be simulated than with accelerated molecular dynamics alone.