The first example of a nitrile hydratase model complex that reversibly binds nitriles

Nitrile hydratase (NHase) is an iron-containing metalloenzyme that converts nitriles to amides. The mechanism by which this biochemical reaction occurs is unknown. One mechanism that has been proposed involves nucleophilic attack of an Fe-bound nitrile by water (or hydroxide). Reported herein is a five-coordinate model compound ([Fe(III)(S(2)(Me2)N(3)(Et,Pr))](+)) containing Fe(III) in an environment resembling that of NHase, which reversibly binds a variety of nitriles, alcohols, amines, and thiocyanate. XAS shows that five-coordinate [Fe(III)(S(2)(Me2)N(3)(Et,Pr))](+) reacts with both methanol and acetonitrile to afford a six-coordinate solvent-bound complex. Competitive binding studies demonstrate that MeCN preferentially binds over ROH, suggesting that nitriles would be capable of displacing the H(2)O coordinated to the iron site of NHase. Thermodynamic parameters were determined for acetonitrile (DeltaH = -6.2(+/-0.2) kcal/mol, DeltaS = -29.4(+/-0.8) eu), benzonitrile (-4.2(+/-0.6) kcal/mol, DeltaS = -18(+/-3) eu), and pyridine (DeltaH = -8(+/-1) kcal/mol, DeltaS = -41(+/-6) eu) binding to [Fe(III)(S(2)(Me2)N(3)(Et,Pr))](+) using variable-temperature electronic absorption spectroscopy. Ligand exchange kinetics were examined for acetonitrile, iso-propylnitrile, benzonitrile, and 4-tert-butylpyridine using (13)C NMR line-broadening analysis, at a variety of temperatures. Activation parameters for ligand exchange were determined to be DeltaH(+ +) = 7.1(+/-0.8) kcal/mol, DeltaS(+ +) = -10(+/-1) eu (acetonitrile), DeltaH(+ +) = 5.4(+/-0.6) kcal/mol, DeltaS(+ +) = -17(+/-2) eu (iso-propionitrile), DeltaH(+ +) = 4.9(+/-0.8) kcal/mol, DeltaS(+ +) = -20(+/-3) eu (benzonitrile), and DeltaH(+ +) = 4.7(+/-1.4) kcal/mol DeltaS(+ +) = -18(+/-2) eu (4-tert-butylpyridine). The thermodynamic parameters for pyridine binding to a related complex, [Fe(III)(S(2)(Me2)N(3)(Pr,Pr))](+) (DeltaH = -5.9(+/-0.8) kcal/mol, DeltaS = -24(+/-3) eu), are also reported, as well as kinetic parameters for 4-tert-butylpyridine exchange (DeltaH(+ +) = 3.1(+/-0.8) kcal/mol, DeltaS(+ +) = -25(+/-3) eu). These data show for the first time that, when it is contained in a ligand environment similar to that of NHase, Fe(III) is capable of forming a stable complex with nitriles. Also, the rates of ligand exchange demonstrate that low-spin Fe(III) in this ligand environment is more labile than expected. Furthermore, comparison of [Fe(III)(S(2)(Me2)N(3)(Et,Pr))](+) and [Fe(III)(S(2)(Me2)N(3)(Pr,Pr))](+) demonstrates how minor distortions induced by ligand constraints can dramatically alter the reactivity of a metal complex.     

Uptake of weathered p,p′-DDE by plant species effective at accumulating soil elements

Ten plant species previously shown to accumulate inorganic elements effectively from natural solids were grown under field conditions in p,p′-dichlorodiphenyldichloroethane (p,p′-DDE) contaminated soil. The plant species, which included rye, mustard, canola, vetch, pigeonpea, clover, peanut, and 3 cultivars of white lupin, represented both monocots and dicots, as well as two major families within the dicots: the Brassicaceae and the Fabaceae. The plants varied widely in their ability to phytoextract and translocate weathered p,p′-DDE. The percentage of contaminant phytoextracted ranged from 0.06% (white lupin) to 0.22% (clover, vetch), and the translocation factors (TF; contaminant concentration ratio of stems to roots) ranged from 0.04 (clover, white lupin) to 0.37 (canola). An inverse relationship exists between the amount of contaminant in the roots as measured by the root BCF (bioconcentration factor; dry weight contaminant concentration ratio of root to soil) and the TF. Duplicate mounds of each species were periodically amended with nitrogen (N), phosphorus (P), nitrogen and phosphorus together (N/P); a minus phosphorus treatment involved the addition of AlSO₄ to the soil prior to planting. The effect of nutrient regime on plant biomass, p,p′-DDE uptake and translocation, and inorganic element content varied greatly among the 10 plant species. For some species (rye, vetch, pigeonpea, clover, white lupin), reductions or non-significant changes in p,p′-DDE uptake were observed under the nutrient treatments and were not correlated with plant biomass effects. For mustard, canola, and peanut, the percentage of p,p′-DDE phytoextracted in the various treatments was more than doubled and was directly correlated with a two-fold increase in total plant biomass. Although it is generally assumed that fertilizer amendments will enhance the phytoremediation of organic and inorganic pollutants, the data here suggest that such effects are highly species specific and in some cases may actually decrease remediation potential.     

Partial order complementation graphs

Two partial ordersP andQ on a setX arecomplementary (written asPQ) if they share no ordered pairs (except for loops) but the transitive closure of the union is all possible ordered pairs. For each positive integern we form a graph Pos _n consisting of all nonempty partial orders on {1, ,n} with edges denoting complementation. We investigate here properties of the graphs Pos _n . In particular, we show:

Induced radioactivity of LDEF materials and structural components

We present an overview of the Long Duration Exposure Facility (LDEF) induced activation measurements. The LDEF, which was gravity-gradient stabilized, was exposed to the low Earth orbit (LEO) radiation environment over a 5.8 year period. Retrieved activation samples and structural components from the spacecraft were analyzed with low and ultra-low background HPGe gamma spectrometry at several national facilities. This allowed a very sensitive measurement of long-lived radionuclides produced by proton- and neutron-induced reactions in the time-dependent, non-isotropic LEO environment. A summary of major findings from this study is given that consists of directionally dependent activation, depth profiles, thermal neutron activation, and surface beryllium-7 deposition from the upper atmosphere. We also describe a database of these measurements that has been prepared for use in testing radiation environmental models and spacecraft design.     

1-(Organosulfonyloxy)-3(1H)-1,2-benziodoxoles: Preparation and Reactions with Alkynyltrimethylsilanes

Organosulfonyloxy derivatives of 1,2-benziodoxol-3(1H)-one (3a-c) and 3,3-bis(trifluoromethyl)-3(1H)-1,2-benziodoxole (5a-c) can be prepared in high yield by the reaction of 1-hydroxybenziodoxoles 1 or 4 and the corresponding sulfonic acids or Me(3)SiOTf in the form of stable, but moderately hygroscopic, microcrystalline solids. Reaction of the triflate derivatives 3a and 5a with alkynyltrimethylsilanes affords either alkynyliodonium triflates 6, or (E)-beta-(trifluoromethanesulfonyloxy)alkenyliodonium triflates 7, while the same reaction in the presence of pyridine selectively gives the respective 1-alkynylbenziodoxoles 8 and 9 in 82-90% yield.