Ion calorimetry: Using mass spectrometry to measure melting points

Calorimetry measurements have been used to probe the melting of aluminum cluster cations with 63 to 83 atoms. Heat capacities were determined as a function of temperature (from 150 to 1050 K) for size-selected cluster ions using an approach based on multicollision-induced dissociation. The experimental method is described in detail and the assumptions are critically evaluated. Most of the aluminum clusters in the size range examined here show a distinct peak in their heat capacities that is attributed to a melting transition (the peak is due to the latent heat). The melting temperatures are below the bulk melting point and show enormous fluctuations as a function of cluster size. Some clusters (for example, n = 64, 68, and 69) do not show peaks in their heat capacities. This behavior is probably due to the clusters having a disordered solid-like phase, so that melting occurs without a latent heat.     

Fragmentation dynamics and energy disposal in photodissociation of (N2O)2+ in the 458–660 nm wavelength range

The nitrous oxide dimer cation (N₂O)₂⁺ has been studied in the visible wavelength range by photodissociation of a mass-selected high-energy ion beam followed by energy analysis of the charged photofragments. Information on the angular anisotropy of the fragmentation process has been obtained by rotating the polarization direction of the laser light. The results allow conclusions to be drawn about the lifetime of the optically accessed excited electronic state and on the energy disposal in the photofragmentation event.     

Electric dipole moments and conformations of isolated peptides

The electric dipole moments of the isolated amino acid tryptophan and small glycine-based peptides (WG_n, n = 1-5, W = tryptophan, G = glycine) have been measured by deflection of a molecular beam in an inhomogeneous electric field. The measurements are compared to the results of ab initio calculations and Monte-Carlo simulations. The conformation and the flexibility of the peptides, at different temperatures, are discussed. The WG_n peptides are much more floppy than an isolated tryptophan, even a single glycine is enough to make the peptide floppy on the timescale of the electric deflection measurements. Received 4 January 2002 Published online 13 September 2002     

The fragmentation of metastable NH+3 ions and isotopic analogs: an example of tunneling through a rotational barrier

The fragmentation of metastable NH⁺₃ ions and isotopic analogs via the reaction NH⁺₃ → NH⁺₂ + H has been investigated using mass analysed ion kinetic energy spectrometry (MIKES). Kinetic energy release distributions and the metastable intensity were measured as a function of ion source temperature. Both the average kinetic energy release and the metastable intensity increase with ion source temperature. The data are consistent with the metastable reaction arising from tunneling through a rotational barrier. The experimental data are compared with the predictions of a tunneling model.     

Structures of Mo2Oy- and Mo2Oy (y=2, 3, and 4) studied by anion photoelectron spectroscopy and density functional theory calculations

The competitive structural isomers of the Mo(2)O(y) (-)Mo(2)O(y) (y=2, 3, and 4) clusters are investigated using a combination of anion photoelectron (PE) spectroscopy and density functional theory calculations. The PE spectrum and calculations for MoO(3) (-)MoO(3) are also presented to show the level of agreement to be expected between the spectra and calculations. For MoO(3) (-) and MoO(3), the calculations predict symmetric C(3v) structures, an adiabatic electron affinity of 3.34 eV, which is above the observed value 3.17(2) eV. However, there is good agreement between observed and calculated vibrational frequencies and band profiles. The PE spectra of Mo(2)O(2) (-) and Mo(2)O(3) (-) are broad and congested, with partially resolved vibrational structure on the lowest energy bands observed in the spectra. The electron affinities (EA(a)s) of the corresponding clusters are 2.24(2) and 2.33(7) eV, respectively. Based on the calculations, the most stable structure of Mo(2)O(2) (-) is Y shaped, with the two Mo atoms directly bonded. Assignment of the Mo(2)O(3) (-) spectrum is less definitive, but a O-Mo-O-Mo-O structure is more consistent with overall electronic structure observed in the spectrum. The PE spectrum of Mo(2)O(4) (-) shows cleanly resolved vibrational structure and electronic bands, and the EA of the corresponding Mo(2)O(4) is determined to be 2.13(4) eV. The structure most consistent with the observed spectrum has two oxygen bridge bonds between the Mo atoms.     

Water molecule adsorption on protonated dipeptides

Equilibrium constants for the adsorption of the first water molecule on six protonated dipeptides (Gly-Gly+H(+), Gly-Ala+H(+), Ala-Gly+H(+), Ala-Ala+H(+), Pro-Gly+H(+), and Gly-Trp+H(+)) have been measured as a function of temperature, and DeltaH(o) and DeltaS(o) determined. Density functional theory calculations were performed for both the unsolvated peptides and the peptide water complexes at the B3LYP/6-311++G level. MP2/6-311++G** calculations were also carried out for Gly/Ala peptides. The calculations suggest that adsorption of a water molecule by these simple dipeptides is a complex process, both the unsolvated peptide and the peptide-water complexes have multiple conformations with similar free energies. Average DeltaH(o) and DeltaS(o) values derived from the calculations are in reasonable agreement with the experimental results. According to the calculations, the dominant water adsorption process involves a significant conformational change to accommodate a bridging water molecule. DeltaH(o) is diminished for Pro-Gly+H(+) mainly because the water interacts with a secondary amine, whereas for Gly-Trp+H(+), DeltaH(o) is significantly decreased by the loss of cation-pi interactions upon water adsorption. For unsolvated peptides the proton affinities of the N-terminus and the backbone carbonyl groups are known to be similar. Addition of a single water molecule causes a significant stabilization of the N-terminus protonation site.     

Chemisorption and chemical reactions on size selected clusters

Low energy ion beam techniques have been used to perform a detailed study of the reactions of Al ₂₅ ⁺ and Si ₂₅ ⁺ with a range of simple molecules (D₂, CH₄, O₂, C₂H₄, CO and N₂). The reactions were studied over a center of mass collision energy range from 0.2eV up to 7eV. Activation barriers for chemisorption onto the clusters were deduced from the experimental results. The activation barriers for chemisorption on Al ₂₅ ⁺ and Si ₂₅ ⁺ are generally similar and show a qualitative correlation with the electronic properties of the reactant molecule. However, the products of the chemical reactions of Al ₂₅ ⁺ and Si ₂₅ ⁺ which result from cluster fragmentation are quite different. Si ₂₅ ⁺ shows a tendency to undergo fission as observed in a number of recent studies of the dissociation of the bare clusters.     

Entropic stabilization of isolated beta-sheets

Temperature-dependent electric deflection measurements have been performed for a series of unsolvated alanine-based peptides (Ac-WA(n)-NH(2), where Ac = acetyl, W = tryptophan, A = alanine, and n = 3, 5, 10, 13, and 15). The measurements are interpreted using Monte Carlo simulations performed with a parallel tempering algorithm. Despite alanine's high helix propensity in solution, the results suggest that unsolvated Ac-WA(n)-NH(2) peptides with n > 10 adopt beta-sheet conformations at room temperature. Previous studies have shown that protonated alanine-based peptides adopt helical or globular conformations in the gas phase, depending on the location of the charge. Thus, the charge more than anything else controls the structure.     

Non-covalent interactions between unsolvated peptides: helical complexes based on acid-base interactions

We have used ion-mobility mass spectrometry to examine the conformations of the protonated complex formed between AcA(7)KA(6)KK and AcEA(7)EA(7), helical alanine-based peptides that incorporate glutamic acid (E) and lysine (K). Designed interactions between the acidic E and basic K residues help to stabilize the complex, which is generated by electrospray and studied in the gas phase. There are two main conformations: (1) a coaxial linear arrangement where the helices are tethered together by an EKK interaction between the pair of lysines at the C-terminus of the AcA(7)KA(6)KK peptide and a glutamic acid at the N-terminus of the AcEA(7)EA(7) peptide and (2) a coiled-coil arrangement with side-by-side antiparallel helices where there is an additional EK interaction between the E and K residues in the middle of the helices. The coiled-coil opens up to the coaxial linear structure as the temperature is raised. Entropy and enthalpy changes for the opening of the coiled-coil were derived from the measurements. The enthalpy change indicates that the interaction between the E and K residues in the middle of the helices is a weak neutral hydrogen bond. The EKK interaction is significantly stronger.     

Techniques used to study the chemistry of gas phase elemental clusters

Recent studies of the chemistry of elemental clusters (such as C _n , Si _n , and Fe _n ) in the gas phase have revealed a number of fascinating results. This review article discusses and compares the various techniques that have been used to investigate the chemical properties of gas phase elemental clusters. Examples are provided of the often complimentary information that can be obtained from the different methods.