Splicing I: Using mixed basis sets in ab initio calculations

The effect of mixing (or “splicing”) extended and minimal basis sets on molecular properties such as geometries, Mulliken charges, dipoles, and internal rotation barriers was studied for several test molecules. The effect is gauged by comparison with full extended basis set calculations. It is found that splicing improves most properties relative to full minimal basis set calculations, and little accuracy is lost if the splicing is done in a judicious manner.     

Quasilocalization of extra electrons in high density methane and ethane gases

The extent of electron quasilocalization in the high density gases is greater in ethane than in methane. However, the density required for quasilocalization in methane is n/n_c > 0.1, while that in ethane is n/n_c > 0.4, where n_c is the critical density. The mobilities in methane and ethane cross at n = 6 × 10²¹ molecules/cm³, in the respective fluids along their vapor/liquid coexistence curves.     

ABNORMAL EMBRYONIC DEVELOPMENT OF THE AMERICAN SEA URCHIN FOLLOWING ILLUMINATION OF GAMETES WITH VISIBLE LIGHT FROM A PHOTOTHERAPY UNIT

Abstract— The unfertilized oocytes and spermatozoa of the American sea urchin ( Arbacia punctulata ) were exposed to phototherapy lights in order to determine the effect of this treatment regimen on post-irradiation fertilization and embryonic development. Light treatment revealed dose-dependent abnormalities in fertilization and subsequent embryonic development.     

Dissociation behavior of doubly-charged tryptic peptides: correlation of gas-phase cleavage abundance with ramachandran plots

Analysis of fragmentation patterns from 5654 unique doubly charged tryptic peptides is obtained. Great variability of average relative abundance of bond cleavage is found between different amino acid combinations. There exist similarities as well as differences between b and y ions. Strong enhancement or suppression of cleavage gives insight into possible chemical interactions at reactive conformations formed by preferred phi-psi angles.     

Ruthenium(II) complexes of monodonor ligands: efficient reagents for asymmetric ketone hydrogenation

[Chemical reaction: See text] A series of BINOL-derived ligands have been prepared and incorporated into ruthenium(II) complexes containing a diamine ligand. The complexes have proven to be excellent catalysts for the asymmetric hydrogenation of ketones, giving reduction products with enantiomeric excesses of up to 99%.     

CHLOROPHYLL ONE-ELECTRON PHOTOCHEMISTRY-II. PHOTOSENSITIZATION BY CHLOROPHYLL,PHEOPHYTIN AND BACTERIOCHLOROPHYLL OF A ONE-ELECTRON TRANSFER REACTION BETWEEN ETHANOL AND QUINONE*

Abstract— Chlorophyll, pheophytin and bacteriochlorophyll sensitize a one-electron transfer in the presence of quinones in ethanol, to produce a ternary complex of ground state porphyrin analog, alcohol cation radical and semiquinone anion radical as the primary photo-product at low temperature. A similar photo-oxidation of alcohol to produce a binary complex is caused by direct excitation of quin-one in the absence of chlorophyll. The mechanisms of these reactions and their implications for photosynthesis are discussed.     

Regioselective ortho lithiation of halopyridines

Regioselective ortho lithiation of 2-, 3-, and 4-halopyridines is achieved with lithium diisopropylamide (?78°, tetrahydrofuran) to afford, upon quenching with electrophilic reagents, 2,3- and 3,4-disubstituted pyridines in good to excellent yield.     

Unusual selectivity of unprotected aziridines in palladium-catalyzed allylic amination enables facile preparation of branched aziridines

Functionalized branched aziridines can be prepared in high yields and with high levels of regioselectivity using unprotected aziridines as nitrogen sources in palladium-catalyzed allylic amination. High levels of enantioselectivity can be achieved with BINAP on palladium. This methodology allows for strategic placement of an aziridine-containing fragment within a complex molecule environment for further elaboration.     

A fast computer algorithm for finding the permanent of adjacency matrices

A fast computer algorithm is described which brings computation of the permanents of sparse matrices, specifically, chemical adjacency matrices, within the reach of a desktop computer. Examples and results are presented, along with a discussion of the relationship of the permanent to the Kekulé structure count. Also presented is a C-language implementation which was deliberately written for ease of translation into other high-level languages.     

Gradients of the Exchange-repulsion Energy in the General Effective Fragment Potential Method

Formulae for calculating the analytic gradients of the exchange-repulsion energy in the general effective fragment potential (EFP2) method are derived and implemented using a direct differentiation approach. The timings for the exchange repulsion gradient evaluations are approximately three times longer than the energy evaluations, orders of magnitude faster than a previous implementation. Since the direct differentiation approach is not approximate, the gradients can be used with confidence in molecular dynamics and Monte Carlo simulations with the EFP2 method.